Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 129 5e-25 >seq1 Length=5759619 Score = 129 bits (142), Expect = 5e-25 Identities = 255/375 (68%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| || ||||| ||||||||| || |||||||||||||||||| | || Sbjct 2010275 AACATGTGGCACGGCGGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGC 2010216 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 | ||| | | |||| ||| | | | | ||| | | | || ||||| Sbjct 2010215 ACGATGCGCCGGTCGTACGGGCTCGTCCGCAGCTTGTGCACCACCTCGGCCAGCTGGTCG 2010156 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | |||||||| | ||||| | |||||||||||||||||||||| ||||||| |||| Sbjct 2010155 ACGCCCTGGCCCGCGTAGTCGGTCGCCGCGTCCACGTACGCCGCCCCGAAGTGCCGCCAC 2010096 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || |||| |||||| || | ||| |||| || | | || Sbjct 2010095 TGGAACCCGTACACCGGGCCCAGGTCCCCCACCGCCCGGTGGCCCAGCCCCACGCTGTCC 2010036 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTG-AAAGCTCCCT 20670 |||||||| | || || || |||||| |||||||| || | || | ||| || Sbjct 2010035 AGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGAC-CCCGGCCTCGCTGAGCGCCAG 2009977 Query 20671 GGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACAC 20730 || || | ||| || ||||| |||||||| ||| || | ||| ||||| Sbjct 2009976 CGACGACGTGTTGCCCGCCACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACAC 2009917 Query 20731 CCGCTTTGTGGTTAG 20745 |||||| ||||| || Sbjct 2009916 CCGCTTGGTGGTCAG 2009902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372628968040