Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 5e-25
>seq1
Length=5759619
Score = 129 bits (142), Expect = 5e-25
Identities = 255/375 (68%), Gaps = 2/375 (1%)
Strand=Plus/Minus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| ||| || ||||| ||||||||| || |||||||||||||||||| | ||
Sbjct 2010275 AACATGTGGCACGGCGGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGC 2010216
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
| ||| | | |||| ||| | | | | ||| | | | || |||||
Sbjct 2010215 ACGATGCGCCGGTCGTACGGGCTCGTCCGCAGCTTGTGCACCACCTCGGCCAGCTGGTCG 2010156
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| |||||||| | ||||| | |||||||||||||||||||||| ||||||| ||||
Sbjct 2010155 ACGCCCTGGCCCGCGTAGTCGGTCGCCGCGTCCACGTACGCCGCCCCGAAGTGCCGCCAC 2010096
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611
||||| ||||| || || |||| |||||| || | ||| |||| || | | ||
Sbjct 2010095 TGGAACCCGTACACCGGGCCCAGGTCCCCCACCGCCCGGTGGCCCAGCCCCACGCTGTCC 2010036
Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTG-AAAGCTCCCT 20670
|||||||| | || || || |||||| |||||||| || | || | ||| ||
Sbjct 2010035 AGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGAC-CCCGGCCTCGCTGAGCGCCAG 2009977
Query 20671 GGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACAC 20730
|| || | ||| || ||||| |||||||| ||| || | ||| |||||
Sbjct 2009976 CGACGACGTGTTGCCCGCCACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACAC 2009917
Query 20731 CCGCTTTGTGGTTAG 20745
|||||| ||||| ||
Sbjct 2009916 CCGCTTGGTGGTCAG 2009902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372628968040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |