Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 5e-24
seq4 123 6e-23
>seq8
Length=2477967
Score = 127 bits (140), Expect = 5e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321
|| ||||| || | ||||| || || ||||| || ||||||| ||| ||||| |||||
Sbjct 2273359 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 2273300
Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
|| | || || || |||||||||| |||||||| ||||| ||||| || |||
Sbjct 2273299 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 2273240
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || | || || || || || | ||| || || || || || ||||| |||
Sbjct 2273239 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 2273180
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476
|| || || || ||||||||||| |||||||| ||
Sbjct 2273179 TTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 2273145
>seq4
Length=3212107
Score = 123 bits (136), Expect = 6e-23
Identities = 170/234 (73%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| || || ||||| | || || || |||| || ||| || || || || ||||||
Sbjct 2383884 TGACCGCCACGGAGACGGAGAACCAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAGTCG 2383825
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || || || || || || || || || || ||||| |||||||||||| ||
Sbjct 2383824 CTCAAGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGA---TCC 2383768
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGA 288419
||| || ||||| || |||||||| || ||| || ||||| || |||| ||| |||
Sbjct 2383767 GGGGGAATACCTTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATAGTATCCGACGA 2383709
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||||||||| || |||| ||||||||||| ||||||||
Sbjct 2383708 CTCAACCTCGAGGGTGATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 2383655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653931456018
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |