Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2 192 7e-44
>seq2
Length=5746313
Score = 192 bits (212), Expect = 7e-44
Identities = 1049/1654 (63%), Gaps = 49/1654 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|||||||||||||| |||||||| || || |||||||| | | ||||| |
Sbjct 597844 CGGAGGTAGTACATGCCCGTCTTCAGGCCTAGCTTCCAGCCCGTGAAGTGCATGCTCGTG 597785
Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715
| |||| | || ||| | | |||| || ||||| | |||||||| ||||||||
Sbjct 597784 ATCTTGCCCA-TGGTGGGGTCCCGCATGTGGATGTTCAAAGACTGGGATTGGTCGATGAA 597726
Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 113772
| ||||| || || ||||| | |||| | | || ||| |||||||| ||
Sbjct 597725 GGCACCACGGTCGGCAGCCATCTG---CACAACGGTTCGCTGAGAGATCTCCCACACGGT 597669
Query 113773 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832
|||| ||| ||| || || | || || | || || |||||||| |||||| |
Sbjct 597668 CTTGTACAGGGCCTTGATCTCCGCCGGAATGTTGGGAATGTTCTGGATGGAACCACCCTC 597609
Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892
| || ||| |||||| | | ||||| ||||| || | ||| |||| ||
Sbjct 597608 AGCAATGATACGATTCTTCATGTTGTCGGACCACAGACCCATGTCGACGAGGTCCTTCAG 597549
Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGG 113951
|| ||||| || ||||| || || ||| || | ||| ||||| ||||
Sbjct 597548 CAGCCAGGGGTTGACCACCTGGAACTCGCCAGCTAGGACACGACG-AGAGTAGATGTTGG 597490
Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011
|| || ||||| || ||||| ||||| |||| ||| || | || ||| |||||||
Sbjct 597489 ATGTATAGGGCTCGAAACACTCGTTGTTGCCCAGGATCTGAGATGTACTGGCAGTGGGCA 597430
Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071
| || ||||| | || ||||| |||| ||| || | | | || | || |||||| |
Sbjct 597429 TAGGAGCCATCAACAGACTGTTGCGGACACCATTCTGCTTGATCTGCTCTTTGAGGCTCT 597370
Query 114072 CCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 114129
||||||| | | | || | | | | |||||| || | || |||||||| ||
Sbjct 597369 CCCAGTCCCAAAGGTCAGATGGGGTGACG--TTCCACATGTCGTATTGTAGGATACCCTG 597312
Query 114130 GGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC----GG 114185
|||| | || || ||||| | || ||| || || | ||| || | || |
Sbjct 597311 GGAGACAGGTGAGCCCTCGTAGGTGGAGTAGGGTCCTTGCTCCTTGGCGATCTCCATGGA 597252
Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTG 114244
|||| | | ||| | || || || ||||| || || | || | ||||| |
Sbjct 597251 AGCTGTC----AAGGCACCATGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTGCCTAG 597196
Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304
||||| || || || | | ||| | ||| |||| || ||||||||||||
Sbjct 597195 -CCTCGGGAGACTCGAAAGGCATGCGGAGGGCTAGAAAAGCATCAGCAAGACCTTGGACA 597137
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364
|||||||| || || || |||| ||| || || || || | || || || |
Sbjct 597136 CCGAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGCGCCTCTTGAACAGGGTAGTAG 597077
Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC---CTTTGTGATTTCATGAAGC 114421
|| ||| || | | | || || || | ||||| || |||| || || |||
Sbjct 597076 TTGACATCAATGATCTTGTTCAGGTT---GCGCACAACAGTCTGCGTGACGTCGTGCAGC 597020
Query 114422 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481
|| | | ||| | || | | | ||| || || || || | || |||
Sbjct 597019 TTCTGAAAGTCATAGACGCCCTGGTTGTAGTCGACGAACGAGGGCAGAGCCAGAGAGGCC 596960
Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541
| ||| || || | | |||||| | | ||| || || || || || || | |||
Sbjct 596959 AAATTGCAGACGGCGACCTCATCAGGTGCCGAGTATTCAATGATCTCGGTGCAGAGATTA 596900
Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA-CACGCATCCTTGTA 114600
|| || |||||||||| ||||||||| || ||| ||| || | ||||||||
Sbjct 596899 GAGCTGCGGATGGTGCCCAGGTTCTTTTGGTTACTCTTGCGGTTGGCATGG-TCCTTGTA 596841
Query 114601 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 114659
|||||| | || | || ||||| || |||| || |||||||| | ||||| | || |
Sbjct 596840 GAGCATGAAAGGGTTACCAGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGAGCTTCTG 596781
Query 114660 CGGCTGGCACAGTGGCGTTGGC-TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCA 114718
| || | | | | | | | ||| ||||| |||||||||| ||||||||| ||
Sbjct 596780 GGCCTTGATCTTTTG--TCGACCTCGGCCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCG 596723
Query 114719 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 114778
||||| || || | || | || || || || || ||||| | || | |||
Sbjct 596722 AACTCATCGCCGTAAACATCGGCCAGGCCAGGGCACTCATTGGGGCACATAAGCGTCCAC 596663
Query 114779 TGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGA 114838
| || || ||||||||| ||||||||||| || || |||||||| || ||| |||
Sbjct 596662 TCTCCGTTCTTCTCAACACGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGA 596603
Query 114839 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 114898
|| ||| ||| | ||||| | || || || || | |||| || || | || |
Sbjct 596602 TCGCGAGCGCGGACCTCTTCTTTACCATGGTTCTTTCGGAGATCCAGGAACTCAAAGACA 596543
Query 114899 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCC 114952
|| | |||||| || || || || | || | | || | | || ||| |
Sbjct 596542 TCGGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACC---AGGTCGCTTGTTGCCACCT 596486
Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012
|||| || || | || ||| || || ||||||||||| |||| ||||||| |||
Sbjct 596485 TGGTCGACGTATCGAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCATTGGAT 596426
Query 115013 TGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATAC 115070
|| || || || ||| ||| ||| | | || | | | ||||||| | ||
Sbjct 596425 GTACCGTTGGTACCGGCGATATAAGAGCC--GGTCGCACGAATACGGTGGATGTTGAGAC 596368
Query 115071 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGT 115130
| ||||| || ||| ||| ||||| ||||| | |||| || | || || || |
Sbjct 596367 CGATACCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAAATACCAT 596308
Query 115131 CGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 115190
| || |||| |||| | ||| ||||||||| |||| || | | || ||||
Sbjct 596307 CAATGCTGTCATCCTTCATGTCGACAAGGAAGCAAGATGACAGCTGAGCCTGGGGCGTAC 596248
Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224
|||||||||| || || || | ||||| ||||
Sbjct 596247 CAGCGTTGAACAGAGTAGGAGAGGCGTGTGTGAA 596214
Score = 86.0 bits (94), Expect = 7e-12
Identities = 115/160 (72%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| || ||||||||||| ||||| | || || |||||| ||| ||
Sbjct 3731396 GCAAAGTCAGTGTGTAGGCCCTCGTCACGCGAGATCAACTCGTTGGAGAAGGTCAGGCCA 3731337
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| ||||| |||||||| | |||||| || | || | ||| |||||||||
Sbjct 3731336 GGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATA 3731277
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206
||||| ||| ||||| || | | || | ||||||||
Sbjct 3731276 CCCTCGACAGCAGCGAAGGCGACCAAGCGTTGAGCAAAGG 3731237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353368525480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |