Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 192 7e-44 >seq2 Length=5746313 Score = 192 bits (212), Expect = 7e-44 Identities = 1049/1654 (63%), Gaps = 49/1654 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| |||||||| || || |||||||| | | ||||| | Sbjct 597844 CGGAGGTAGTACATGCCCGTCTTCAGGCCTAGCTTCCAGCCCGTGAAGTGCATGCTCGTG 597785 Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | || ||| | | |||| || ||||| | |||||||| |||||||| Sbjct 597784 ATCTTGCCCA-TGGTGGGGTCCCGCATGTGGATGTTCAAAGACTGGGATTGGTCGATGAA 597726 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT---GATTTCCCACACAGT 113772 | ||||| || || ||||| | |||| | | || ||| |||||||| || Sbjct 597725 GGCACCACGGTCGGCAGCCATCTG---CACAACGGTTCGCTGAGAGATCTCCCACACGGT 597669 Query 113773 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGC 113832 |||| ||| ||| || || | || || | || || |||||||| |||||| | Sbjct 597668 CTTGTACAGGGCCTTGATCTCCGCCGGAATGTTGGGAATGTTCTGGATGGAACCACCCTC 597609 Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | || ||| |||||| | | ||||| ||||| || | ||| |||| || Sbjct 597608 AGCAATGATACGATTCTTCATGTTGTCGGACCACAGACCCATGTCGACGAGGTCCTTCAG 597549 Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGG 113951 || ||||| || ||||| || || ||| || | ||| ||||| |||| Sbjct 597548 CAGCCAGGGGTTGACCACCTGGAACTCGCCAGCTAGGACACGACG-AGAGTAGATGTTGG 597490 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 || || ||||| || ||||| ||||| |||| ||| || | || ||| ||||||| Sbjct 597489 ATGTATAGGGCTCGAAACACTCGTTGTTGCCCAGGATCTGAGATGTACTGGCAGTGGGCA 597430 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 | || ||||| | || ||||| |||| ||| || | | | || | || |||||| | Sbjct 597429 TAGGAGCCATCAACAGACTGTTGCGGACACCATTCTGCTTGATCTGCTCTTTGAGGCTCT 597370 Query 114072 CCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 114129 ||||||| | | | || | | | | |||||| || | || |||||||| || Sbjct 597369 CCCAGTCCCAAAGGTCAGATGGGGTGACG--TTCCACATGTCGTATTGTAGGATACCCTG 597312 Query 114130 GGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC----GG 114185 |||| | || || ||||| | || ||| || || | ||| || | || | Sbjct 597311 GGAGACAGGTGAGCCCTCGTAGGTGGAGTAGGGTCCTTGCTCCTTGGCGATCTCCATGGA 597252 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTG 114244 |||| | | ||| | || || || ||||| || || | || | ||||| | Sbjct 597251 AGCTGTC----AAGGCACCATGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTGCCTAG 597196 Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 ||||| || || || | | ||| | ||| |||| || |||||||||||| Sbjct 597195 -CCTCGGGAGACTCGAAAGGCATGCGGAGGGCTAGAAAAGCATCAGCAAGACCTTGGACA 597137 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 |||||||| || || || |||| ||| || || || || | || || || | Sbjct 597136 CCGAGGCCGATGGGACGGTGTCGCATGTTGCTGTTGCGCGCCTCTTGAACAGGGTAGTAG 597077 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC---CTTTGTGATTTCATGAAGC 114421 || ||| || | | | || || || | ||||| || |||| || || ||| Sbjct 597076 TTGACATCAATGATCTTGTTCAGGTT---GCGCACAACAGTCTGCGTGACGTCGTGCAGC 597020 Query 114422 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481 || | | ||| | || | | | ||| || || || || | || ||| Sbjct 597019 TTCTGAAAGTCATAGACGCCCTGGTTGTAGTCGACGAACGAGGGCAGAGCCAGAGAGGCC 596960 Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541 | ||| || || | | |||||| | | ||| || || || || || || | ||| Sbjct 596959 AAATTGCAGACGGCGACCTCATCAGGTGCCGAGTATTCAATGATCTCGGTGCAGAGATTA 596900 Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA-CACGCATCCTTGTA 114600 || || |||||||||| ||||||||| || ||| ||| || | |||||||| Sbjct 596899 GAGCTGCGGATGGTGCCCAGGTTCTTTTGGTTACTCTTGCGGTTGGCATGG-TCCTTGTA 596841 Query 114601 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 114659 |||||| | || | || ||||| || |||| || |||||||| | ||||| | || | Sbjct 596840 GAGCATGAAAGGGTTACCAGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGAGCTTCTG 596781 Query 114660 CGGCTGGCACAGTGGCGTTGGC-TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCA 114718 | || | | | | | | | ||| ||||| |||||||||| ||||||||| || Sbjct 596780 GGCCTTGATCTTTTG--TCGACCTCGGCCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCG 596723 Query 114719 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 114778 ||||| || || | || | || || || || || ||||| | || | ||| Sbjct 596722 AACTCATCGCCGTAAACATCGGCCAGGCCAGGGCACTCATTGGGGCACATAAGCGTCCAC 596663 Query 114779 TGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGA 114838 | || || ||||||||| ||||||||||| || || |||||||| || ||| ||| Sbjct 596662 TCTCCGTTCTTCTCAACACGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGA 596603 Query 114839 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 114898 || ||| ||| | ||||| | || || || || | |||| || || | || | Sbjct 596602 TCGCGAGCGCGGACCTCTTCTTTACCATGGTTCTTTCGGAGATCCAGGAACTCAAAGACA 596543 Query 114899 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCC 114952 || | |||||| || || || || | || | | || | | || ||| | Sbjct 596542 TCGGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACC---AGGTCGCTTGTTGCCACCT 596486 Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012 |||| || || | || ||| || || ||||||||||| |||| ||||||| ||| Sbjct 596485 TGGTCGACGTATCGAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCATTGGAT 596426 Query 115013 TGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATAC 115070 || || || || ||| ||| ||| | | || | | | ||||||| | || Sbjct 596425 GTACCGTTGGTACCGGCGATATAAGAGCC--GGTCGCACGAATACGGTGGATGTTGAGAC 596368 Query 115071 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGT 115130 | ||||| || ||| ||| ||||| ||||| | |||| || | || || || | Sbjct 596367 CGATACCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAAATACCAT 596308 Query 115131 CGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 115190 | || |||| |||| | ||| ||||||||| |||| || | | || |||| Sbjct 596307 CAATGCTGTCATCCTTCATGTCGACAAGGAAGCAAGATGACAGCTGAGCCTGGGGCGTAC 596248 Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 |||||||||| || || || | ||||| |||| Sbjct 596247 CAGCGTTGAACAGAGTAGGAGAGGCGTGTGTGAA 596214 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || ||||||||||| ||||| | || || |||||| ||| || Sbjct 3731396 GCAAAGTCAGTGTGTAGGCCCTCGTCACGCGAGATCAACTCGTTGGAGAAGGTCAGGCCA 3731337 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| ||||| |||||||| | |||||| || | || | ||| ||||||||| Sbjct 3731336 GGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATA 3731277 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 ||||| ||| ||||| || | | || | |||||||| Sbjct 3731276 CCCTCGACAGCAGCGAAGGCGACCAAGCGTTGAGCAAAGG 3731237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353368525480