Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 210 2e-49
>seq2
Length=5746313
Score = 210 bits (232), Expect = 2e-49
Identities = 1066/1674 (64%), Gaps = 44/1674 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| ||||| || || ||||| ||| | |||||
Sbjct 596046 AACTACCAATACTTCGGCTTCAAGACTTTGGAGCGATCATATCTCCTGAAGCTTAATGGC 596105
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||| |||| || || || | ||||| || || | || || || ||
Sbjct 596106 AAGATTGTGGAGAGACCACAGCATATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGAC 596165
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| || ||| | | ||| || |||| |||| | || |||
Sbjct 596166 GACATCGAGAGGGTTATTGAGACTTACAACCTCATGTCCAGCAAGTACTTCACACACGCC 596225
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || || ||||||||||| || || || | | ||| |||| || || ||||| |
Sbjct 596226 TCTCCTACTCTGTTCAACGCTGGTACGCCCCAGGCTCAGCTGTCATCTTGCTTCCTTGTC 596285
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| ||| || |||| |||| ||||||| || || | ||
Sbjct 596286 GAC-ATGAAGGATGACAGCATTGATGGTATTTATGACACCCTCAAGACTTGCGCCATGAT 596344
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
||| || || || || ||||| ||| ||||| |||| ||||| | || ||
Sbjct 596345 CTCCAAGATGGCCGGTGGTATCGGTCTCAACATCCAC--CGTATTCGTGCGACCGGCTCT 596402
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|| ||| ||||||||| || || ||||| || | || || ||||| || || ||||||
Sbjct 596403 TATATCGCCGGTACCAACGGTACATCCAATGGTATTGTTCCCATGCTTCGCGTGTTCAAC 596462
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || ||||| ||||| ||||| | | | ||| | || || |||||
Sbjct 596463 AACACTGCTCGATACGTCGACCAAGGTGGCAACAAGCGACCTGGTGCCTTTGCTATCTAT 596522
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
||||||||||||||| | || || | ||| | || || ||||||||||| || ||
Sbjct 596523 CTCGAGCCCTGGCACTCCGATGTCTTTGAGTTCCTGGATCTCCGAAAGAACCATGGTAAA 596582
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | || | || || ||| || |||||| | || || || || ||||||
Sbjct 596583 GAAGAGGTCCGCGCTCGCGATCTTTTCCTTGCCCTCTGGATTCCCGATCTCTTCATGAAA 596642
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| ||| | |||| ||| | || |||||||| || || || ||| ||
Sbjct 596643 CGTGTTGAGAAGAACGGAGAGTGGACGCTTATGTGCCCCAATGAGTGCCCTGGCCTGGCC 596702
Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC--AA 94427
|| |||| | ||| | | || || | | | || | ||||| | ||||| |
Sbjct 596703 GATGTTTACGGCGAT-GAG-TTCGAGGCCCTCTACGAGAAGTACGAGGCCGAGGGCCGAG 596760
Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
| | | || | || | || |||||| ||| || || |||| | ||| ||
Sbjct 596761 GTCGACAAAAG--ATCAAGGCCCAGAAGCTCTGGTATGCTATTCTGGAGGCCCAGACCGA 596818
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||| |||| || | ||| | | ||||||| || |||| |||| ||||| || |
Sbjct 596819 GACTGGTAACCCTTTCATGCTCTACAAGGACCATGCCAACCGCAAGAGTAACCAAAAGAA 596878
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
||| || ||| ||||| ||||| ||||||||||| | || || | | || ||
Sbjct 596879 CCTGGGCACCATCCGCAGCTCTAATCTCTGCACCGAGATCATTGAATACTCGGCACCTGA 596938
Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667
||| | || || || || ||| ||| | ||| || | ||||| ||| |||
Sbjct 596939 TGAGGTCGCCGTCTGCAATTTGGCCTCTCTGGCTCTGCCCTCGTTCGT-CGA-----CTA 596992
Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727
|| | | || || | || | || |||| || || || | | ||
Sbjct 596993 CA--ACCAGGGCGTC-TATGACTTTCAGAAGCTGCACGACGTCACGCAGACTGTTGTGCG 597049
Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
|||||||||| | | || || |||| |||||| || | |||||| ||| ||
Sbjct 597050 CAACCTGAACAAGATCATTGATGTCAACTACTACCCTGTTCAAGAGGCGCGCAACAGCAA 597109
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || ||||||||| |||| ||||| ||| | || || || | | |
Sbjct 597110 CATGCGACACCGTCCCATCGGCCTCGGTGTCCAAGGTCTTGCTGATGCTTTTCTAGCCCT 597169
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATATTCGAAAGC 94905
|| |||| | ||| ||| ||| || ||| | | || | | || ||||| | |
Sbjct 597170 CCGCATGCCTTTCGAGTCTCCCGAGGCTAGGCAG--CTCAACAAGCAGATCTTCGAGACC 597227
Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965
||||| | || ||| ||| | ||| | | | |||| ||| || || ||
Sbjct 597228 ATTTACCATGGTGCCTTGACAGCTTCCATGGAGATCGCCA---AGGAGCAAGGACCCTAC 597284
Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025
| | | || || || | ||||| || | || | |||| | ||| ||
Sbjct 597285 TCCACCTACGAGGGCTCACCTGTCTCCCAGGGTATCCTACAATACGACATGTGGAACGTC 597344
Query 95026 AAGCCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAAACACGGTG 95083
| || || | || | |||||||| || ||| | | || ||| | || | | ||||
Sbjct 597345 ACCCCATCTGACCTTTGGGACTGGGAGAGCCTCAAAGAGCAGAT-CAAGCAGA-ATGGTG 597402
Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143
| ||| ||| | |||| || |||||||| ||| || | |||||||| ||||
Sbjct 597403 TCCGCAACAGTCTGTTGATGGCTCCTATGCCCACTGCCAGTACATCTCAGATCCTGGGCA 597462
Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203
||||||||| ||||| |||| || |||||| | ||| | || || || || || |
Sbjct 597463 ACAACGAGTGTTTCGAGCCCTATACATCCAACATCTACTCTCGTCGTGTCCTAGCTGGCG 597522
Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGT 95262
| |||| || ||||| || || |||||| | || | ||||| |||||
Sbjct 597523 AGTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTCGTCGAC-ATGGGTCTGTGGTCC 597581
Query 95263 GACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318
||||| | ||||| | | |||| | | || ||| |||||||||| || |
Sbjct 597582 GACAACATGAAGAATCGTATCATTGCTGAGGG----TGGTTCCATCCAGAACATTCCCAA 597637
Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| |||| ||| |||||||| || ||||||||||||||||||||| | |||||
Sbjct 597638 CATTCCGGCGGAGATCAAGGCCCTGTACAAGACCGTGTGGGAGATCTCTCAGCG 597691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723008294760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |