Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq11 95.1 1e-14
>seq11
Length=1453465
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930
|| |||||||| || || || | ||||| |||||| |||| | | || || | ||
Sbjct 1028900 ATCATGATTACTTATCCTAGCACGTACGGTGTCTTTGAACCTAAAGTCAAGAAAG-TGTG 1028958
Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990
| || | ||||| | | || || ||||| || | ||||| || ||| | || || ||
Sbjct 1028959 TGAGCTGGTTCACGCACACGGAGGGCAGGTTTACATGGATGGCGCCAATATGAACGCCCA 1029018
Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050
| | ||||| ||| |||| || || ||||| || ||||| ||| | |||||
Sbjct 1029019 GATTGGACTCTGCTCCCCAGGTGAAATCGGCGCTGATGTCTGCCATCTCAACCTCCATAA 1029078
Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||| || || ||||| || ||||||||||| || || ||||| | |||
Sbjct 1029079 GACATTCTGCATCCCGCATGGCGGCGGAGGTCCTGGTGTGGGCCCTATCGCTGT 1029132
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 153772 GGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACA 153831
|||| || | || ||||| | ||| || ||||||||||| ||||| || || || |
Sbjct 1027686 GGTTCGGCGTGCCAATGGGCTTTGGTGGCCCTCATGCTGCTTTCTTCGCGGTGACTGAAA 1027745
Query 153832 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATA 153891
|| | ||||||||||| ||||| || | || || | | | || | ||| |
Sbjct 1027746 AGCACAAGAGAAAGATCCCTGGGAGGTTAGTTGGCCTGACTAAGGACCGCATGGGTCGCA 1027805
Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951
||||||| || | || | ||||| ||||||||||| ||| | ||||| || || || |
Sbjct 1027806 AAGCATATCGACTGGCCTTGCAGACAAGAGAGCAGCACATCCGAAGAGAGAAGGCCACGA 1027865
Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTA 154000
| ||| | || || | || || || |||| || ||| | ||||||
Sbjct 1027866 GCAACGTTTGTACGTCGCAAGCCTTGTTGGCCAACATGAGCGCATTCTA 1027914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212575555040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |