Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 >seq11 Length=1453465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 154872 ATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTA-GACAGATATG 154930 || |||||||| || || || | ||||| |||||| |||| | | || || | || Sbjct 1028900 ATCATGATTACTTATCCTAGCACGTACGGTGTCTTTGAACCTAAAGTCAAGAAAG-TGTG 1028958 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 | || | ||||| | | || || ||||| || | ||||| || ||| | || || || Sbjct 1028959 TGAGCTGGTTCACGCACACGGAGGGCAGGTTTACATGGATGGCGCCAATATGAACGCCCA 1029018 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAA 155050 | | ||||| ||| |||| || || ||||| || ||||| ||| | ||||| Sbjct 1029019 GATTGGACTCTGCTCCCCAGGTGAAATCGGCGCTGATGTCTGCCATCTCAACCTCCATAA 1029078 Query 155051 AACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||| || || ||||| || ||||||||||| || || ||||| | ||| Sbjct 1029079 GACATTCTGCATCCCGCATGGCGGCGGAGGTCCTGGTGTGGGCCCTATCGCTGT 1029132 Score = 84.2 bits (92), Expect = 3e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 153772 GGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACA 153831 |||| || | || ||||| | ||| || ||||||||||| ||||| || || || | Sbjct 1027686 GGTTCGGCGTGCCAATGGGCTTTGGTGGCCCTCATGCTGCTTTCTTCGCGGTGACTGAAA 1027745 Query 153832 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATA 153891 || | ||||||||||| ||||| || | || || | | | || | ||| | Sbjct 1027746 AGCACAAGAGAAAGATCCCTGGGAGGTTAGTTGGCCTGACTAAGGACCGCATGGGTCGCA 1027805 Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951 ||||||| || | || | ||||| ||||||||||| ||| | ||||| || || || | Sbjct 1027806 AAGCATATCGACTGGCCTTGCAGACAAGAGAGCAGCACATCCGAAGAGAGAAGGCCACGA 1027865 Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTA 154000 | ||| | || || | || || || |||| || ||| | |||||| Sbjct 1027866 GCAACGTTTGTACGTCGCAAGCCTTGTTGGCCAACATGAGCGCATTCTA 1027914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212575555040