Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq11 100 3e-16
>seq11
Length=1453465
Score = 100 bits (110), Expect = 3e-16
Identities = 164/234 (70%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATG 159605
|| |||||||| ||||| || | ||||| |||||| | || ||| || || | ||
Sbjct 1028900 ATCATGATTACTTATCCTAGCACGTACGGTGTCTTTGAACCTAAAGTCAAGAAAG-TGTG 1028958
Query 159606 TAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACA 159665
| || | ||||| | | || || ||||| || | ||||| || ||| | || || ||
Sbjct 1028959 TGAGCTGGTTCACGCACACGGAGGGCAGGTTTACATGGATGGCGCCAATATGAACGCCCA 1029018
Query 159666 GGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAA 159725
| | || || ||| |||| || || ||||| || ||||| ||| | |||||
Sbjct 1029019 GATTGGACTCTGCTCCCCAGGTGAAATCGGCGCTGATGTCTGCCATCTCAACCTCCATAA 1029078
Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
||||||||| || || ||||| || ||||||||||| || || ||||| | |||
Sbjct 1029079 GACATTCTGCATCCCGCATGGCGGCGGAGGTCCTGGTGTGGGCCCTATCGCTGT 1029132
Score = 91.5 bits (100), Expect = 2e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 158447 GGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACA 158506
|||| || | || ||||| | || || ||||||||||| ||||| || || || |
Sbjct 1027686 GGTTCGGCGTGCCAATGGGCTTTGGTGGCCCTCATGCTGCTTTCTTCGCGGTGACTGAAA 1027745
Query 158507 AGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATA 158566
|| | ||||||||||| ||||| || | || || | | | || || ||| |
Sbjct 1027746 AGCACAAGAGAAAGATCCCTGGGAGGTTAGTTGGCCTGACTAAGGACCGCATGGGTCGCA 1027805
Query 158567 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCA 158626
||||||| || | || | ||||| ||||||||||| ||| ||||||| || || || |
Sbjct 1027806 AAGCATATCGACTGGCCTTGCAGACAAGAGAGCAGCACATCCGAAGAGAGAAGGCCACGA 1027865
Query 158627 GTAACATCTGCACAGCACAAGCACTGCTGGCTAATATG 158664
| ||| | || || | ||||| || |||| || |||
Sbjct 1027866 GCAACGTTTGTACGTCGCAAGCCTTGTTGGCCAACATG 1027903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050972130160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |