Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 2e-18
>seq4
Length=3212107
Score = 107 bits (118), Expect = 2e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | || ||| | || | || ||||| || || || || ||||| || | |
Sbjct 2383132 CCTCCACGTAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 2383073
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | | || || | |||||| || ||||| |||||||||||||| || |||||
Sbjct 2383072 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGCGGG 2383013
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || || || || || | || | |||||| || | || ||
Sbjct 2383012 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACGTTGTCGATAGTGTCGGAGGACTCGACC 2382953
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACG 101476
|| ||||||| || |||||||| | || || || || |||||||||||| ||
Sbjct 2382952 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGGTTGCG 2382899
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | ||||| || ||||| || || || ||||| ||| | || | | |
Sbjct 2383870 ACGGAGAACCAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAGTCGCTCAAGGTACGGCC 2383811
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||| ||||| || ||||| || | |||||||||||| || ||||| ||||| ||
Sbjct 2383810 ATCCTCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCTT 2383751
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || || || || || | || | ||| || |||| || || || || ||||
Sbjct 2383750 GTCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGAT 2383691
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| || || || || || || || || ||||||||
Sbjct 2383690 CGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 2383655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278250281067
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |