Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4 107 1e-18 >seq4 Length=3212107 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || || ||||| ||| ||| |||| | || ||||||||||| |||||||| Sbjct 2383618 CTCTTTCTGGATGTTGTAGTCACTCAGAGTTCGGCCATCCTCCAACTGCTTGCCGGCAAA 2383559 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||| ||||| || | |||| ||||||||||| |||||| || || Sbjct 2383558 GATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTT 2383499 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || | ||| ||||| | ||| || || ||||| |||||||| || || Sbjct 2383498 GTCAATAGTATCCGATGACTCAACCTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTGAC 2383439 Query 48755 AAAAATCTGCAT 48766 ||| || ||||| Sbjct 2383438 AAAGATTTGCAT 2383427 Score = 95.1 bits (104), Expect = 9e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| || ||||| || || ||||||||||||| ||||| || |||||| Sbjct 2383809 TCCTCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCTTG 2383750 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| || || | | || || |||| ||| ||||| | || ||| Sbjct 2383749 TCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGATC 2383690 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || || || || |||||||| Sbjct 2383689 GTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 2383655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937456077013