Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 >seq11 Length=1453465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || ||||||||||| || ||||| || || |||||||||||||| Sbjct 1029132 ACAGCGATAGGGCCCACACCAGGACCTCCGCCGCCATGCGGGATGCAGAATGTCTTATGG 1029073 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| || || |||| ||| || || | ||| || Sbjct 1029072 AGGTTGAGATGGCAGACATCAGCGCCGATTTCACCTGGGGAGCAGAGTCCAATCTGGGCG 1029013 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | || ||||| || || | | ||||| | || ||| | | Sbjct 1029012 TTCATATTGGCGCCATCCATGTAAACCTGCCCTCCGTGTGCGTGAACCAGCTCACACA-C 1028954 Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | || ||| || | |||||| ||||| | || ||||| |||||||| || Sbjct 1028953 TTTCTTGACTTTAGGTTCAAAGACACCGTACGTGCTAGGATAAGTAATCATGAT 1028900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998175638120