Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2 221 1e-52
>seq2
Length=5746313
Score = 221 bits (244), Expect = 1e-52
Identities = 1016/1586 (64%), Gaps = 33/1586 (2%)
Strand=Plus/Plus
Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263
|||| | |||||| | ||| ||||||| || || | || ||| || || ||||| |
Sbjct 596113 TGGAGAGACCACAGCATATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGACGACATCG 596172
Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACC 75321
| || | ||||| ||| || |||||| |||| || |||| ||||| | ||
Sbjct 596173 AGAGGGTTATTGAGACTTACAACCTCATGTCCAGCAAG-TAC-TTCACACACGCCTCTCC 596230
Query 75322 AACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381
|| || ||||| |||||||| || | ||| |||| |||||||||| ||| ||
Sbjct 596231 TACTCTGTTCAACGCTGGTACGCCCCAGGCTCAGCTGTCATCTTGCTTCCTTGTCGACAT 596290
Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAA--ATCTCA 75439
||||| ||| || | ||||| |||| || || | | | | ||||| | |||||
Sbjct 596291 GAAGGATGACAGCATTGATGGTATTTATGACACCCTCAAG-ACT-TGCGCCATGATCTCC 596348
Query 75440 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 75499
||| ||| || ||||| || | ||||||| | | | || | ||| |||
Sbjct 596349 AAGATGGCCGGTGGTATCGGTCTCAACATCCACCGTATTCGTGCGACCGGCTCTTATATC 596408
Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559
|| || || ||| ||| |||||||| |||| ||||||||||| || ||| |||
Sbjct 596409 GCCGGTACCAACGGTACATCCAATGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACT 596468
Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGTC--GCAA--GGGGTCCATCGCGGTCTACTTGGA 75615
|| || || || | |||| | ||| | || | || || | || |||| | ||
Sbjct 596469 GCTCGATACGTCGACCAAG-GTGGCAACAAGCGACCTGGTGCCTTTGCTATCTATCTCGA 596527
Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675
|| ||||| ||||| || | |||||||| || | ||| ||||| ||| | |||||
Sbjct 596528 GCCCTGGCACTCCGATGTCTTTGAGTTCCTGGATCTCCGAAAGAACCATGGTAAAGAAGA 596587
Query 75676 GGCTCGGTGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
|| || | | ||||| ||| | | |||| |||||||| || || |||||||| || |
Sbjct 596588 GGTCCGCGCTCGCGATCT-TTTCCTTGCCCTCTGGATTCCCGATCTCTTCATGAAACGTG 596646
Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACG 75794
||||| || || | ||| | ||| | || || | || || || || |||| |
Sbjct 596647 TTGAGAAGAACGGAGAGTGGACGCTTATGTGCCCCAATGAGTGCCCTGGCCTGGCCGATG 596706
Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGA-GCCAAT 75853
|| || ||||| || ||||||||| ||||| || | ||||| || | | |
Sbjct 596707 TTTACGGCGATGAGTTCGAGGCCCTCTACGAGAAGTACGAGGCCGAGGGCCGAGGTCGA- 596765
Query 75854 GCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912
| | | | || | | || | | ||| | |||||||| | | ||||| ||||||||
Sbjct 596766 -CAAAAGATCAAGGCCCAGAAGCTCTGGTATGCTATTCTGGAGGCCCAGACCGAGACTGG 596824
Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972
| || | ||||| |||||||| | ||| ||||||||||||||||| ||||
Sbjct 596825 TAACCCTTTCATGCTCTACAAGGACCATGCCAACCGCAAGAGTAACCAAAAGAACCTGGG 596884
Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032
|| ||| ||||| ||||| ||||| || || | || ||| | | ||||||
Sbjct 596885 CACCATCCGCAGCTCTAATCTCTGCACCGAGATCATTGAATACTCGGCACCTGATGAGGT 596944
Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092
|| || ||||||||||| || | || || || || ||| | | | ||
Sbjct 596945 CGCCGTCTGCAATTTGGCCTCTCTGGCTCTGCCCTCGTTCGTCGACTACAACCAGGGCGT 597004
Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152
| ||| | | | || || || || |||| ||| |||| || || ||| |
Sbjct 597005 CTATGACTTTCAGAAGCTGCACGACGTCACGCAGACTGTTGTGCGCAACCTGAACAAGAT 597064
Query 76153 CATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212
|||||| || | || || ||| | ||||| || || ||||||||| | ||
Sbjct 597065 CATTGATGTCAACTACTACCCTGTTCAAGAGGCGCGCAACAGCAACATGCGACACCGTCC 597124
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTT-G 76271
|| || | ||||| |||||||| || |||| ||| | |||| | || ||| |
Sbjct 597125 CATCGGCCTCGGTGTCCAAGGTCTTGCTGATGCTTTTCTAGCCCTCCGC-ATGCCTTTCG 597183
Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331
| || || || | | || | || | ||||| || ||||| || || | ||
Sbjct 597184 AGTCTCCCGAGGCTAGGCAGCTCAACAAGCAGATCTTCGAGACCATTTACCATGGTGCCT 597243
Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391
|| || || | || | | ||||| |||| || | ||||| || |
Sbjct 597244 TGACAGCTTCCATGGAGATCGCCAAGGAGCAAGGACCCTACTCCACCTACGAGGGCTCAC 597303
Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TA 76449
| | ||||| || | || || | || |||| |||| || | || | || | | |
Sbjct 597304 CTGTCTCCCAGGGTATCCTACAATACGACATGT-GGAACGT-CACCCCATCTGACCTTTG 597361
Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509
|||||||| ||||| || | |||||| |||| ||| | || |||||||| |||||
Sbjct 597362 GGACTGGGAGAGCCTCAAAGAGCAGATCAAGCAGAATGGTGTCCGCAACAGTCTGTTGAT 597421
Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569
||| || ||||| || ||| || | || ||| |||| || || || || || || ||
Sbjct 597422 GGCTCCTATGCCCACTGCCAGTACATCTCAGATCCTGGGCAACAACGAGTGTTTCGAGCC 597481
Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629
|| ||| | ||||||||| | | ||| || || ||||| | ||||||
Sbjct 597482 CTATACATCCAACATCTACTCTCGTCGTGTCCTAGCTGGCGAGTTCCAGGTGGTCAACCC 597541
Query 76630 GCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---T 76686
|| | || |||||| | || ||||| |||||| | | |||||| ||| |
Sbjct 597542 CTGGCTGCTGAAGGACCTCGTCGACATGGGTCTGTGGTCCGACAACATGAAGAATCGTAT 597601
Query 76687 CA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745
|| || ||| |||||||||||| || || || | | || || | || ||||||
Sbjct 597602 CATTGCTGA----GGGTGGTTCCATCCAGAACATTCCCAACATTCCGGCGGAGATCAAGG 597657
Query 76746 ATCTCTACCGCACAGTGTGGGAAATC 76771
|| ||| || |||||||| |||
Sbjct 597658 CCCTGTACAAGACCGTGTGGGAGATC 597683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569368829280
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