Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq4 86.0 1e-11
>seq4
Length=3212107
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439
|||| ||||| || || ||||||||||| | | ||||||||| || || || ||||| |
Sbjct 2383811 CATCCTCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCT 2383752
Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499
| || || || || | || || || |||| ||| ||||| || || || || || |
Sbjct 2383751 TGTCCTGGATCTTGCTCTTGACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGA 2383692
Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || || || ||||| || | || ||||||||
Sbjct 2383691 TCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 2383655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479608976850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |