Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 1e-11 >seq4 Length=3212107 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || |||| || | ||| || |||| |||||| || || || || Sbjct 2383656 ATACCACCACGCAGACGTAGAACCAGATGCAAGGTAGACTCTTTCTGGATGTTGTAGTCA 2383597 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || ||| | || ||||| || || || ||||| || |||| ||||||||||| Sbjct 2383596 CTCAGAGTTCGGCCATCCTCCAACTGCTTGCCGGCAAAGATCAATCGTTGTTGGTCAGGA 2383537 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || || || || || | || || || |||||||| || || || Sbjct 2383536 GGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATAGTATCCGATGACTCA 2383477 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || || ||||| || || || || || || | || || ||||| Sbjct 2383476 ACCTCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 2383427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135649259800