Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 2e-23
>seq2
Length=5746313
Score = 125 bits (138), Expect = 2e-23
Identities = 316/478 (66%), Gaps = 7/478 (1%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|||||||| ||| | | || || ||||| ||||| ||||||||||| | || ||
Sbjct 596271 TCTTGCTTCCTTGTCGACATGAAGGATGACAGCATTGATGGTATTTATGACACCCTCAAG 596330
Query 110580 GAAACTGCTC--TTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTC 110637
| ||| | | || || || | | || || || ||| | || | || |||||
Sbjct 596331 --ACTTGCGCCATGATCTCCAAGATGGCCGGTGGTATCGGTCTCAACATCCACCGTATTC 596388
Query 110638 GCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGT 110697
| | | || | ||||||| | || ||| | || | ||| ||||||| |||
Sbjct 596389 GTGCGACCGGCTCTTATATCGCCGGTACCAACGGTACATCCAATGGTATTGTTCCCATGC 596448
Query 110698 TAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCT 110754
| | || |||||| ||||||| ||| || | |||||||| || | || |||
Sbjct 596449 TTCGCGTGTTCAACAACACTGCTCGATACGTCGACCAAGGTGGCAACAAGCGACCTGGTG 596508
Query 110755 CATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTA 110814
| ||||||||||||||||| || ||||| || ||| | ||||| ||| | || || || |
Sbjct 596509 CCTTTGCTATCTATCTCGAGCCCTGGCACTCCGATGTCTTTGAGTTCCTGGATCTCCGAA 596568
Query 110815 AAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAG 110874
| || || || ||||| | || || ||| | || ||| | |||||| | |
Sbjct 596569 AGAACCATGGTAAAGAAGAGGTCCGCGCTCGCGATCTTTTCCTTGCCCTCTGGATTCCCG 596628
Query 110875 ATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTT 110934
|| | ||||||||||||||| | | || || |||| | |||||||| || || |
Sbjct 596629 ATCTCTTCATGAAACGTGTTGAGAAGAACGGAGAGTGGACGCTTATGTGCCCCAATGAGT 596688
Query 110935 CTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGA 110992
||||| || | ||||| || || | ||||| || | ||| ||||| || || ||
Sbjct 596689 GCCCTGGCCTGGCCGATGTTTACGGCGATGAGTTCGAGGCCCTCTACGAGAAGTACGA 596746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812328612791
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |