Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
>seq1
Length=5759619
Score = 201 bits (222), Expect = 1e-46
Identities = 448/677 (66%), Gaps = 68/677 (10%)
Strand=Plus/Minus
Query 146884 GGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943
||||| || || || | || |||||||| | ||| | ||| ||||||| |||
Sbjct 2010560 GGGAACGGCCGCGGCTCCCGCGCCAGCTGCACCCGCAGCGCCTCGACGTGGTCCGCGTAC 2010501
Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003
||||||||||| |||| | |||| | | ||||||| || | | | |||| |||
Sbjct 2010500 ACGTGCGCGTCGCCCATGACGTGCGTCAGGCTCCCCGGCACCAGCTCCGCCGCGTGCGCC 2010441
Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCC 147063
||||||| || ||||||| |||||| || |||||||| || |||||||| ||||||||
Sbjct 2010440 ACCATGTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACCCCCAGCCCCATGTCG 2010381
Query 147064 CCCGACCTCTGGTACAGCTGGCACGAGAGCT----------------------------- 147094
| | ||||||||||||||| || |
Sbjct 2010380 CAGCTGCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCTGCTTGGTCGTCGTCGTCGCC 2010321
Query 147095 --CCCCGTCGGC-----------------CACGTAAAACTGGCACAGGATGTGGCACGGC 147135
|||||||| | |||||| ||||| | ||||||||||||
Sbjct 2010320 GCCCCCGTCGCCGCTCCCCGCGGGTACGACACGTAGAACTGCGCGAACATGTGGCACGGC 2010261
Query 147136 GGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC 147195
||||||||||| | ||||||||| |||||||| || | ||| | |||| |
Sbjct 2010260 GGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGCACGATGCGCCGGTCG 2010201
Query 147196 TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTC----AGCTGGTCCACGCCCTGGCC 147251
| ||| || || | || | | ||||||| |||||||| |||||||||||
Sbjct 2010200 TACGGGCTCGTCCGCAGCTTGTGCA----CCACCTCGGCCAGCTGGTCGACGCCCTGGCC 2010145
Query 147252 CCCGTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGT 147310
| |||||| ||| |||| |||||||||| ||||| ||||||| ||||||||| ||||
Sbjct 2010144 CGCGTAGTCGGTCGCCGC-GTCCACGTACGCCGCCCCGAAGTGCCGCCACTGGAACCCGT 2010086
Query 147311 ACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTC 147368
|||| || |||||||| || | | ||| | ||||| | ||| | || |||||
Sbjct 2010085 ACACCGGGCCCAGGTCCCCCACCGCCCGGTG-GCCCAGCCC-CACGCTGTCCAGGAACTC 2010028
Query 147369 GGGGGACCCGTGGGCGTCCCAGA---TGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTC 147425
| | ||||||| | ||||||||| || || | ||| || |||| || ||
Sbjct 2010027 GCGCGACCCGTTGCCGTCCCAGATCTTGACCCCGGCCT---CGCTGAGCGCCAGCGACGA 2009971
Query 147426 CGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTT 147485
|||| |||| | |||||| ||||||||| ||| ||| ||| | || |||| |||
Sbjct 2009970 CGTGTTGCCCGCCACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACACCCGCTT 2009911
Query 147486 GGTGGTCAGCAGGGGGA 147502
|||||||||||| ||||
Sbjct 2009910 GGTGGTCAGCAGCGGGA 2009894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487773898400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |