Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 201 1e-46 >seq1 Length=5759619 Score = 201 bits (222), Expect = 1e-46 Identities = 448/677 (66%), Gaps = 68/677 (10%) Strand=Plus/Minus Query 146884 GGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943 ||||| || || || | || |||||||| | ||| | ||| ||||||| ||| Sbjct 2010560 GGGAACGGCCGCGGCTCCCGCGCCAGCTGCACCCGCAGCGCCTCGACGTGGTCCGCGTAC 2010501 Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003 ||||||||||| |||| | |||| | | ||||||| || | | | |||| ||| Sbjct 2010500 ACGTGCGCGTCGCCCATGACGTGCGTCAGGCTCCCCGGCACCAGCTCCGCCGCGTGCGCC 2010441 Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCC 147063 ||||||| || ||||||| |||||| || |||||||| || |||||||| |||||||| Sbjct 2010440 ACCATGTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACCCCCAGCCCCATGTCG 2010381 Query 147064 CCCGACCTCTGGTACAGCTGGCACGAGAGCT----------------------------- 147094 | | ||||||||||||||| || | Sbjct 2010380 CAGCTGCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCTGCTTGGTCGTCGTCGTCGCC 2010321 Query 147095 --CCCCGTCGGC-----------------CACGTAAAACTGGCACAGGATGTGGCACGGC 147135 |||||||| | |||||| ||||| | |||||||||||| Sbjct 2010320 GCCCCCGTCGCCGCTCCCCGCGGGTACGACACGTAGAACTGCGCGAACATGTGGCACGGC 2010261 Query 147136 GGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC 147195 ||||||||||| | ||||||||| |||||||| || | ||| | |||| | Sbjct 2010260 GGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGCACGATGCGCCGGTCG 2010201 Query 147196 TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTC----AGCTGGTCCACGCCCTGGCC 147251 | ||| || || | || | | ||||||| |||||||| ||||||||||| Sbjct 2010200 TACGGGCTCGTCCGCAGCTTGTGCA----CCACCTCGGCCAGCTGGTCGACGCCCTGGCC 2010145 Query 147252 CCCGTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGT 147310 | |||||| ||| |||| |||||||||| ||||| ||||||| ||||||||| |||| Sbjct 2010144 CGCGTAGTCGGTCGCCGC-GTCCACGTACGCCGCCCCGAAGTGCCGCCACTGGAACCCGT 2010086 Query 147311 ACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTC 147368 |||| || |||||||| || | | ||| | ||||| | ||| | || ||||| Sbjct 2010085 ACACCGGGCCCAGGTCCCCCACCGCCCGGTG-GCCCAGCCC-CACGCTGTCCAGGAACTC 2010028 Query 147369 GGGGGACCCGTGGGCGTCCCAGA---TGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTC 147425 | | ||||||| | ||||||||| || || | ||| || |||| || || Sbjct 2010027 GCGCGACCCGTTGCCGTCCCAGATCTTGACCCCGGCCT---CGCTGAGCGCCAGCGACGA 2009971 Query 147426 CGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTT 147485 |||| |||| | |||||| ||||||||| ||| ||| ||| | || |||| ||| Sbjct 2009970 CGTGTTGCCCGCCACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACACCCGCTT 2009911 Query 147486 GGTGGTCAGCAGGGGGA 147502 |||||||||||| |||| Sbjct 2009910 GGTGGTCAGCAGCGGGA 2009894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487773898400