Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 >seq4 Length=3212107 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| ||| |||||| || | || |||| |||||| || ||||| Sbjct 2383845 TCCTTCTGAATGTTGTAGTCGCTCAAGGTACGGCCATCCTCCAACTGCTTGCCAGCAAAG 2383786 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||| || |||| |||| | ||||||||| |||||| ||| | ||| Sbjct 2383785 ATAAGACGCTGTTGATCCGGGGGAATACCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTT 2383727 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || ||| || ||||| | |||||||| || |||||||| || || || Sbjct 2383726 GTCAATAGTATCCGACGACTCAACCTCGAGGGTGATCGTCTTTCCCGTCAATGTCTTGAC 2383667 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2383666 GAAGATCTGCAT 2383655 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| |||| | ||| || | || |||||||||||||| || || Sbjct 2383389 TCCTTTTGAATGTTGTAGTCGGAGAGGGTACGTCCATCCTCCAGCTGCTTACCAGCGAAG 2383330 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| ||||| | || | || ||||||||| ||||| ||| | | | Sbjct 2383329 ATCAATCGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTG 2383270 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| ||| || ||||| | || || || || || || Sbjct 2383269 TCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTGCCAGT 2383223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793425317480