Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 >seq4 Length=3212107 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||||||| | | || | || || | ||| || || Sbjct 2383851 GTTGATTCCTTCTGAATGTTGTAGTCGCTCAAGGTACGGCCATCCTCCAACTGCTTGCCA 2383792 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || ||||||||||||||||| || | ||| || || || ||||||| | || Sbjct 2383791 GCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCTTGTCCTGGATCTTGCTCTTG 2383732 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||| || | | ||||| || || || || | || ||||||| || Sbjct 2383731 ACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGATCGTCTTTCCCGTCAATGTC 2383672 Query 27231 TTCACAAAGATTTGCATA 27248 || || ||||| |||||| Sbjct 2383671 TTGACGAAGATCTGCATA 2383654 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| ||| || ||||| ||||| || || |||||||| ||| Sbjct 2383653 CCACCACGCAGACGTAGAACCAGATGCAAGGTAGACTCTTTCTGGATGTTGTAGTCACTC 2383594 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || | ||| || ||||| | || | || ||||| || || || Sbjct 2383593 AGAGTTCGGCCATCCTCCAACTGCTTGCCGGCAAAGATCAATCGTTGTTGGTCAGGAGGA 2383534 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| | || | | | || | ||| || | | ||||| Sbjct 2383533 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCAATAGTATCCGATGACTCAACC 2383474 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || |||| ||| || ||||||||||||||| Sbjct 2383473 TCAAGCGTGATGGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCATA 2383426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934239454472