Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 2e-22
seq8 93.3 3e-14
>seq4
Length=3212107
Score = 120 bits (132), Expect = 2e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||||||||||| || ||||| || || || || || || |||| ||||||||
Sbjct 2383108 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGTTGC 2383049
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| |||||||| || |||||||||||||| ||||| | ||||||||||| |||| ||
Sbjct 2383048 TTGCCGGCAAAGATCAAACGCTGTTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC-TT 2382990
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| | || ||||| | ||| || || | || || || || |||||
Sbjct 2382989 GGACTTCACGTTGTCGATAGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 2382930
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
| || ||||| || |||||||||
Sbjct 2382929 GAGGGTCTTCACGAAGATCTGCATG 2382905
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | ||||||||| |||||||||||||| || || || || || ||
Sbjct 2383416 AGACGCAGGACAAGGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGT 2383357
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| || || || || ||||||||||| ||||| | ||||||
Sbjct 2383356 CCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGTTGGTCAGGCGGGATGCCCTCC 2383297
Query 34609 TTGTCTGTGATCTT 34622
|||||| |||||
Sbjct 2383296 TTGTCTTGAATCTT 2383283
>seq8
Length=2477967
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | ||||| ||||||||||| || ||||| || || || || || ||
Sbjct 2273365 AGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 2273306
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || ||||| || || || ||||||||||| ||||| | || |||
Sbjct 2273305 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCGGGCGGGATGCCTTCC 2273246
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 2273245 TTGTCCTGGATCTT 2273232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729481091223
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |