Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 2e-44
>seq1
Length=5759619
Score = 194 bits (214), Expect = 2e-44
Identities = 448/673 (67%), Gaps = 64/673 (10%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
||||||||||| || || || |||| | | || ||||| | ||||||||||||||||
Sbjct 2009896 CCGCTGCTGACCACCAAGCGGGTGTTCCTGCGGGCGGTGGTGGCGGAGCTGCTGTGGTTC 2009955
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341
||| ||| |||| | || |||| || | |||| | |||||||||||||
Sbjct 2009956 GTGGCGGGCAACACGTCGTCGCTGGCGCTCAGCGAGGCCGGGG-TCAAGATCTGGGACGG 2010014
Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTC--CCATCTCGGGAGGAGGGCGA 34398
||||||| || || || ||||||| ||| |||| | ||| | ||| || ||| ||
Sbjct 2010015 CAACGGGTCGCGCGAGTTCCTGGACA-GCGTGGGGCTGGGCCACC--GGGCGGTGGGGGA 2010071
Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458
| |||||||||| ||||||||||||||| | ||||| ||||||| ||| || || |||
Sbjct 2010072 CCTGGGCCCGGTGTACGGGTTCCAGTGGCGGCACTTCGGGGCGGCGTA-CGTGGACGCGG 2010130
Query 34459 AG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGC 34517
| | ||||| |||| ||||| | ||||||||| | ||| | ||| || |
Sbjct 2010131 CGACCGACTACGCGGGCCAGGGCGTCGACCAGCTGGCCGAGGTGGTGCACAAGCTGCGGA 2010190
Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577
|| ||| | ||| | | |||||| || |||||||||||||| ||| || ||
Sbjct 2010191 CGAGCCCGTACGACCGGCGCATCGTGCTGAGCGCGTGGAACCCGGCGGACCTGGGCAAGA 2010250
Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT--------CGC--------- 34620
||||||| || |||||||||| || || |||||||| |||
Sbjct 2010251 TGGCGCTGCCGCCGTGCCACATGTTCGCGCAGTTCTACGTGTCGTACCCGCGGGGAGCGG 2010310
Query 34621 -------------------------------GAATGGGGAGCTGTCCTGCCAGCTCTATC 34649
||| || | ||| ||||||||| || |
Sbjct 2010311 CGACGGGGGCGGCGACGACGACGACCAAGCAGAAGGGCCACCTGCACTGCCAGCTGTACC 2010370
Query 34650 AACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCA 34709
| || | ||||||||| | ||||||||||||||||| || || ||||| ||||| |
Sbjct 2010371 AGCGCAGCTGCGACATGGGGCTGGGGGTGCCGTTCAACATCGCGAGCTACGCGCTGCTGA 2010430
Query 34710 CGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG-CTGGTGCATACGT--TGG 34766
|| ||||| | || || | | || | |||| || |||||| ||| || |||| |||
Sbjct 2010431 CGCACATGGTGGCGCACGCGGCGGAGCTGGTGCC-GGGGAGCCTGACGC--ACGTCATGG 2010487
Query 34767 GGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGC 34826
| || ||||| | ||| | ||||| ||||| ||| ||| | |||||| || ||||
Sbjct 2010488 GCGACGCGCACGTGTACGCGGACCACGTCGAGGCGCTGCGGGTGCAGCTGGCGCGGGAGC 2010547
Query 34827 CCCGACCGTTCCC 34839
| || ||||||||
Sbjct 2010548 CGCGGCCGTTCCC 2010560
Score = 194 bits (214), Expect = 2e-44
Identities = 448/673 (67%), Gaps = 64/673 (10%)
Strand=Plus/Minus
Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565
|||||||| || ||||| || |||||| | ||| ||| ||||| ||||| | |||
Sbjct 2010560 GGGAACGGCCGCGGCTCCCGCGCCAGCTGCACCCGCAGCGCCTCGACGTGGTCCGCGTAC 2010501
Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAG-CTCCCCAGGAACCAACCCCACGACATGA 6622
| ||||| || |||| |||| || ||| |||||| || |||| | || | | ||
Sbjct 2010500 ACGTGCGCGTCGCCCATGACGT--GCGTCAGGCTCCCC-GGCACCAGCTCCGCCGCGTGC 2010444
Query 6623 GCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATG 6682
|| | ||||| ||| ||||| ||||| || || ||||||||||||||||| | |||||||
Sbjct 2010443 GCCACCATGTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACCCCCAGCCCCATG 2010384
Query 6683 TCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC------------------ 6724
|| | || || || ||||||||| ||| | || |||
Sbjct 2010383 TCGCAGCTGCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCTGCTTGGTCGTCGTCGTC 2010324
Query 6725 ----------------------GCG--------ACGTAGAATTGGCAGAGGGTGTGGCAC 6754
||| |||||||| || || ||||||||
Sbjct 2010323 GCCGCCCCCGTCGCCGCTCCCCGCGGGTACGACACGTAGAACTGCGCGAACATGTGGCAC 2010264
Query 6755 GGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTG 6814
|| || ||||||||| || ||| |||||||||||||| || |||||| | | |
Sbjct 2010263 GGCGGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGCACGATGCGCCGG 2010204
Query 6815 TCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCC 6874
|| | ||| || | || ||| | ||| | ||||||||| | ||||| |||
Sbjct 2010203 TCGTACGGGCTCGTCCGCAGCTTGTGCACCACCTCGGCCAGCTGGTCGACGCCCTGGCCC 2010144
Query 6875 GAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTA 6933
| ||||| | | ||| || || ||| ||||||| ||||| | |||||||||||||||
Sbjct 2010143 GCGTAGTCGGTCGCCGCGTCCACG-TACGCCGCCCCGAAGTGCCGCCACTGGAACCCGTA 2010085
Query 6934 GACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG--GAACCCC-CGCTTGTCCAGAAAGTC 6990
|||||||||| ||| ||| || ||| | ||| | |||| ||| ||||||| || ||
Sbjct 2010084 CACCGGGCCCAGGTCCCCCACCGCCC--GGTGGCCCAGCCCCACGC-TGTCCAGGAACTC 2010028
Query 6991 TCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG-AGAGCTCCTTGGTGTTCG 7049
|| ||||||| ||||||||||||| | |||| | || |||| || | ||
Sbjct 2010027 GCGCGACCCGTTGCCGTCCCAGATCTTGA-CCCCGGCCTCGCTGAGCGCCAGCGACGACG 2009969
Query 7050 TGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCG 7109
|| ||| ||||||||||||||||||| | ||||| || | | |||| || || |
Sbjct 2009968 TGTTGCCCGCCACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACACCCGCTTGG 2009909
Query 7110 TCGTCAGCAGCGG 7122
| |||||||||||
Sbjct 2009908 TGGTCAGCAGCGG 2009896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262226298320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |