Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq8 122 2e-22
seq4 87.8 4e-12
>seq8
Length=2477967
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || ||| || ||||||||||| |||| | || | || ||
Sbjct 2273359 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 2273300
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| | | ||| ||||| | || ||| |||||||| ||
Sbjct 2273299 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 2273240
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| ||| ||| || ||||| || |||||
Sbjct 2273239 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 2273180
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||||| ||||| ||||||| ||||||
Sbjct 2273179 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 2273148
>seq4
Length=3212107
Score = 87.8 bits (96), Expect = 4e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || || ||| || ||||||||||| || | | || | || ||
Sbjct 2383118 GAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTC 2383059
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||| ||||| | | ||| ||||| | || ||| || ||||| ||
Sbjct 2383058 CTCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGCGGGATGCCCTCCTTGTC 2382999
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || || | || | |||| || ||| || || ||||| || ||
Sbjct 2382998 CTGGATCTTGGACTTCACGTTGTCGATAGTGTCGGAGGACTCGACCTCGAGAGTGATGGT 2382939
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||||||||||| ||||||
Sbjct 2382938 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 2382906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820341716801
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |