Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq694 140 7e-28 >seq694 Length=40397 Score = 140 bits (154), Expect = 7e-28 Identities = 186/256 (73%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| | || || || || | ||| ||||||||| | || || | || |||||| Sbjct 8998 ATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC-TGTCGC 8940 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| | |||||||| || || ||| | ||||||||||| ||||| || |||||| | Sbjct 8939 TCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCT 8880 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 || || || || || || |||| |||||| | | |||||||| | || ||||| Sbjct 8879 GTTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGA 8820 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||||||||| || ||||||||||||||||| |||||||| ||||||| |||| Sbjct 8819 GAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAA 8760 Query 230625 GCCTGGTGTGATGAAG 230640 | |||| || ||| || Sbjct 8759 GGCTGGCGTCATGGAG 8744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057798397684070