Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq146 120 4e-22 >seq146 Length=70891 Score = 120 bits (132), Expect = 4e-22 Identities = 291/439 (66%), Gaps = 4/439 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || ||||||||||| |||||| ||| || || || || | || ||||| | | | Sbjct 29955 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTC 30014 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || |||| | || || |||||||| ||||||||||||||||| ||||| || Sbjct 30015 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 30074 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | | | |||||| || || ||||| |||||||||||| | Sbjct 30075 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 30134 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 || || | ||||| || || | ||| |||| | | || || || ||||| || ||| Sbjct 30135 ATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 30194 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||| | || ||||| || || || | | ||| ||||| | || ||| Sbjct 30195 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 30254 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 54308 | |||||||| || | || ||||| ||| ||||||| || | |||| |||| Sbjct 30255 GTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTG--AGAC 30312 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 54368 | || || || || | || ||||| | ||||| || | || |||||||| || | Sbjct 30313 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGT 30372 Query 54369 CTATACTATCATCCATCAT 54387 | || ||||| ||| |||| Sbjct 30373 CGATGCTATCCTCCTTCAT 30391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707580748720