Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq694 343 2e-89 seq33 145 8e-30 seq97 138 1e-27 seq316 123 3e-23 >seq694 Length=40397 Score = 343 bits (380), Expect = 2e-89 Identities = 582/843 (69%), Gaps = 64/843 (8%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | |||||| | ||||| Sbjct 9660 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 9601 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | |||| | |||||| |||||||| |||||| Sbjct 9600 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 9541 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || ||||| |||||||| || |||||||| |||||||| || |||||||| Sbjct 9540 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 9481 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| |||| | |||| ||| | ||||||| || |||||||||||||| |||||| || Sbjct 9480 TTCAGCTCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 9422 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | || ||| |||||||||||||||| | || | | Sbjct 9421 GGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAA 9362 Query 116932 GGAGAAGCTCC-GTTTGTTGAACGCCATCGAGA--------------------CGATGCC 116970 | || || || |||| ||||||||||| | |||||| Sbjct 9361 GCAG-CGCACCTACCTGTTCAACGCCATCGACAACAGTATGATACACCCCACCCGATGCT 9303 Query 116971 GT------------------GCGTCA--------------AAGA-GAAGGCCGAGTGGGC 116997 | |||||| |||| ||||||||| ||||| Sbjct 9302 ATGGAGCATTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGC 9243 Query 116998 GCTGCGCTGGATCGCCGGCAGAGAGGCCG-CCTTCGGCGAGCGCCTGGTGGCCTTCGCGG 117056 |||||||||||| || || ||| || |||||| ||| ||| | |||||||| | Sbjct 9242 TCTGCGCTGGATCTGCGACA-AGAACTCGACCTTCGCATCGCGTCTGATTGCCTTCGCCG 9184 Query 117057 CCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCG 117116 |||||||||| ||||||| ||| |||||| |||| || ||||||||||| |||| Sbjct 9183 CCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCG 9124 Query 117117 GCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATT 117176 | ||||||||||| || |||||| |||||| ||||| ||| | || ||||| |||| Sbjct 9123 GTCTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAGGGCATGCACA 9064 Query 117177 GCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCA 117236 |||||||||||| |||||||| ||| | | | || ||| | | | ||| Sbjct 9063 CCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCCAGCCCCGAGGCTGTCG 9004 Query 117237 GGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGG 117296 | |||| ||| ||| || |||| |||||| || ||||| || || |||||||| | Sbjct 9003 AGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCTG 8944 Query 117297 TGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGAC 117355 | ||| || || | || ||| | | |||| || ||||||||||||||||| ||| Sbjct 8943 TCGCTCTTCTCGGCATGAA-TGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGAC 8885 Query 117356 AGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTT 117415 | ||| || | | ||| | | | ||| |||||||| | ||||||| | ||||| Sbjct 8884 CGCCTGTTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTC 8825 Query 117416 ATG 117418 ||| Sbjct 8824 ATG 8822 >seq33 Length=265719 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| ||||||||| | || ||||| | | Sbjct 38989 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 39048 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| |||||||||||| |||||||| Sbjct 39049 GACACAATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 39108 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| || |||||||| |||| || |||||| ||||||||| Sbjct 39109 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGTACCCTCTCGGACTACAAC 39168 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| | || |||| || || |||| || | || ||| Sbjct 39169 ATCCAGAAGGAGTCGACTTTGCACCTGGTACTGCGTCTGCGCGGTGGC 39216 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || || ||||| |||| || ||| | || Sbjct 39217 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 39276 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||| ||||| |||| || Sbjct 39277 GACACGATCGACAACG-TGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCA 39335 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || |||||||| |||| |||||| ||| ||||||||| Sbjct 39336 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCCGACTACAA 39395 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| | || ||||| Sbjct 39396 CATTCAGAAGGAGTCGACTCTGCA 39419 Score = 116 bits (128), Expect = 4e-21 Identities = 140/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| | || ||||| | |||||| | | | |||| ||||| Sbjct 38500 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG-TCAAG 38558 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || || ||||| || |||||||||| || | |||| ||| ||| Sbjct 38559 AGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGC 38618 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | || ||||| |||||||||||||||||||||| |||| || Sbjct 38619 AAGCAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTT 38678 Query 40891 CATCTAGT 40898 ||||| || Sbjct 38679 CATCTCGT 38686 Score = 113 bits (124), Expect = 5e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| | || ||||| || | |||| | | |||| ||||| Sbjct 38785 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACGATCGACAACG-TCAAGAG 38843 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | || || || ||||||||| |||||||||| || | |||| ||| ||||| Sbjct 38844 CAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAA 38903 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || || | || ||||| |||||||||||||||||||||| |||| || || Sbjct 38904 GCAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTTCA 38963 Query 40893 TCTAGT 40898 || || Sbjct 38964 CCTCGT 38969 >seq97 Length=191658 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 153331 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 153390 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| |||||||||| || || Sbjct 153391 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 153450 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | |||||||| ||||||||||||||||||| Sbjct 153451 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAG 153510 Query 40879 G 40879 | Sbjct 153511 G 153511 >seq316 Length=54270 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||||||| |||||||||| || || |||| ||| ||||| ||||| || Sbjct 51738 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 51679 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | |||||||| ||||||||||||||||||||| |||| || || || ||| || Sbjct 51678 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 51619 Query 40903 CGCTTGAGGGGCGGCG 40918 ||| || | || |||| Sbjct 51618 CGCCTGCGTGGTGGCG 51603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515207034386640