Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq676 123 5e-23 >seq676 Length=11889 Score = 123 bits (136), Expect = 5e-23 Identities = 285/431 (66%), Gaps = 49/431 (11%) Strand=Plus/Minus Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058 |||| || || |||| ||| |||| || || || || ||||| || || |||||||| | Sbjct 9492 ACCTGCCACACATGCTCTTCTACGGGCCGCCGGGCACGGGCAAAACCTCGACCATCCTCG 9433 Query 254059 CGCTGGCCCGAACC--CTGTT-GGGCGAGGGGAACATGA---GAGAGCGCGTGCTCGAGC 254112 | |||||| || | || | |||| | || ||| | ||| |||||||||| Sbjct 9432 CCCTGGCC--AAGCAGCTCTACGGGCCCG----ACCTGATCCGGTCGCGGGTGCTCGAGC 9379 Query 254113 TGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTC---- 254168 | ||||| || ||||| ||||| | | | |||| ||||||||| |||||| ||| Sbjct 9378 TCAACGCGTCGGACGAGCGCGGCATCGCCATCGTGCGCGACAAGGTCAAGAACTTCGCGC 9319 Query 254169 -----------TCCAA-------------------GATGTCGATTTC-GTCGTTCCAACC 254197 ||||| | ||||| | | | || ||| Sbjct 9318 GGCAGCAGCTATCCAACCCGCCCGCGGGGCCCGCGGGCGTCGAGTACCGCCGGCGGCACC 9259 Query 254198 CGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGC 254257 || || ||||| |||||| || | ||||| |||||||| |||| ||||||| ||||| Sbjct 9258 CG--TGCCCGCCGTTCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAGGACGC 9201 Query 254258 GCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGT 254317 ||| |||||| ||||| || ||||||||| |||| | || || || ||||| || Sbjct 9200 CCAGAGCGCCCTGCGCCGCACCATGGAGACGTACTCGCGCATCACCCGCTTCTGCCTCGT 9141 Query 254318 GTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||||||||||| | ||||||| |||||| || || ||| ||||||| || || Sbjct 9140 CTGCAACTACGTCACCCGCATCATCGACCCGCTCGCCAGCCGCTGCTCCAAGTTCCGCTT 9081 Query 254378 CAGCACCCTCG 254388 || | ||||| Sbjct 9080 CAAGAGCCTCG 9070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073740411833152