Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq146 224 9e-54 seq33 114 1e-20 seq694 105 6e-18 >seq146 Length=70891 Score = 224 bits (248), Expect = 9e-54 Identities = 457/676 (68%), Gaps = 2/676 (0%) Strand=Plus/Plus Query 23026 CGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACA 23085 |||||| | ||||| || || ||||| || || |||||||| || || ||| || Sbjct 29714 CGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCA 29773 Query 23086 TAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATC 23145 || ||| | ||||| || | || | |||||||| || || ||||| ||| Sbjct 29774 AAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 29833 Query 23146 CTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACAT 23205 |||||| |||||| | || | || ||||||||||| | ||||| || || ||| | Sbjct 29834 CTTGTACAGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAG 29893 Query 23206 AGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACG 23264 |||||||| | || ||| |||| | | || || | ||| |||| | ||| | | Sbjct 29894 CTTCTGAGCGCGGACG-GTCTCACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAG 29952 Query 23265 CGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGAC 23324 | || || ||| | || ||| || ||||| || || | | | || ||||| || Sbjct 29953 CCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGG 30012 Query 23325 TCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGA 23384 |||| | || | || || ||| |||| || ||||| || ||||| |||||||||| Sbjct 30013 TCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGA 30072 Query 23385 ACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCA 23444 |||| ||||| || || || ||||| |||||| |||||| | ||| | || | Sbjct 30073 ACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGA 30132 Query 23445 ACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGC 23504 | | ||| || ||||| ||||||||||| | ||| || || ||||| | ||| ||||| | Sbjct 30133 AGATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCAC 30192 Query 23505 CCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGG 23564 |||| || ||||| || || ||||||||||| || | ||||| || | | |||||| Sbjct 30193 CCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGC 30252 Query 23565 ACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAAC 23624 | ||| ||| || | ||| | || || | | |||||| | || || Sbjct 30253 TAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGAC 30312 Query 23625 CTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCT 23684 | |||||||| | | || || ||||| ||||| || || ||||| ||||| || | Sbjct 30313 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGT 30372 Query 23685 CGATGCTGTCCTCTTT 23700 ||||||| ||||| || Sbjct 30373 CGATGCTATCCTCCTT 30388 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 23789 GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCG 23848 ||||| || ||||| || |||||||| ||||||||||| ||||| || || | ||| Sbjct 30530 GACATGAGGTTGTAAGTCTCGATGGCCTTCTCAATGTCCTCGCCGTGAATGCCAACAGCG 30589 Query 23849 ACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATAT 23908 || ||||| ||||| | ||| || |||||| || || | || || ||| ||| Sbjct 30590 ACACGCATAATCATCTGTTGCGGCCTCTCGGCCACCTTTCCATCGATGCGGAGCAGGTAT 30649 Query 23909 GAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATG 23968 || | | || || || || || || || | || | ||||| || |||| || ||| Sbjct 30650 GACCTCTCCAGAGTCTTGAAGCCGAAGTATTGGTACTGGAAGTCGCGGTCGTAGACGATG 30709 Query 23969 GCCGAATTCA 23978 ||||| |||| Sbjct 30710 GCCGAGTTCA 30719 >seq33 Length=265719 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || || ||||| |||| |||||| | || Sbjct 39216 CATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTC 39275 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || | || ||||||||| || | ||||| || || Sbjct 39276 CGACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCA 39335 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| |||| ||| || | ||| || || Sbjct 39336 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCCGACTACAA 39395 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||| || || |||||||| || |||| ||| | ||| | || || Sbjct 39396 CATTCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGTCTGCGTGGTGG 39443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || |||||| | || || || | || Sbjct 38989 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 39048 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || |||||||| ||| | || || |||||| Sbjct 39049 GACACAATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 39108 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| |||| ||| | || | || || ||| Sbjct 39109 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGTACCCTCTCGGACTACAAC 39168 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||| | || |||||||| Sbjct 39169 ATCCAGAAGGAGTCGACTTTGCACCTGGTACT 39200 >seq694 Length=40397 Score = 105 bits (116), Expect = 6e-18 Identities = 283/425 (67%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || || || |||||||||||||| ||||| ||||| ||| ||| || | || || Sbjct 9199 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 9140 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| ||||| || |||||||| || || || |||||| | || || || Sbjct 9139 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGT 9080 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT--TGTCAATAAAC 58152 || ||||| | || || || ||||| ||||| ||| ||| ||||| ||| || | Sbjct 9079 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTC--GAAGC 9022 Query 58153 CGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTG 58212 | | | || || | || |||| |||||| |||| ||||| || ||||| Sbjct 9021 CCAGCCCCGAGGCTGTCGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCC 8962 Query 58213 TCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAGTA 58270 | || || || || || || || | ||||| ||||| | | | | |||| |||| Sbjct 8961 TGACGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTA 8904 Query 58271 CATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || ||| | || | | ||| || | |||||| Sbjct 8903 CATCGAGTTCGTCGCTGACCGCCTGTTGGTGGCGCTCGGCAACAAGA-AGT-ACTACAAC 8846 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 | | || || || || || ||| | || |||||| |||||||| ||||| ||| Sbjct 8845 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTC 8786 Query 58389 GAAAA 58393 || || Sbjct 8785 GAGAA 8781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755874340880