Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq694 113 4e-20 seq33 84.2 2e-11 >seq694 Length=40397 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| ||||| || || || ||||| | ||||| || | || || | | | ||| Sbjct 8989 GAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCTGTCGCTCTTCTCGGC 8930 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||| || || | |||||| ||||||||||||| || || ||| | |||||| || | Sbjct 8929 ATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGTTGGTGGCG 8870 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| ||||| || || |||||||| || ||| | ||||| ||| Sbjct 8869 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCG 8810 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||| ||||| || ||||| ||||||| ||||| || || ||| Sbjct 8809 CTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAC 8765 >seq33 Length=265719 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| || | ||| | || ||||| || || ||||| || || Sbjct 39216 GCCACCGCGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCCGA 39157 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||| || ||||| ||||| || |||||||||| ||||| || || || Sbjct 39156 GAGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 39097 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| || || | | || | |||||| | | ||| || Sbjct 39096 GATGCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACTCGAC 39037 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||||||||| | || || ||||| ||||||||| Sbjct 39036 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATA 38988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496052286688800