Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq146 132 7e-26 seq694 98.7 1e-15 >seq146 Length=70891 Score = 132 bits (146), Expect = 7e-26 Identities = 294/439 (67%), Gaps = 4/439 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 |||||||||||||| ||||||| | | || || || |||| || ||||| | | | Sbjct 29955 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTC 30014 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || | | || || |||||||| ||||||||||||||||| ||||| || Sbjct 30015 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 30074 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | | | ||||| || || ||||| |||||||||||| | Sbjct 30075 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 30134 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 || || | ||||| || || | ||| ||||| | | ||||| || ||||| || ||| Sbjct 30135 ATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 30194 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | ||| | || ||||| || || || | | ||| ||||| | || ||| Sbjct 30195 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 30254 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218 || |||||||| || | || ||||| ||| ||||||| || | |||| |||| Sbjct 30255 GTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTG--AGAC 30312 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || || | || ||||| | ||||| || | || |||||||| || | Sbjct 30313 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGT 30372 Query 80279 CTATGCTATCATCAATCAT 80297 | |||||||| || |||| Sbjct 30373 CGATGCTATCCTCCTTCAT 30391 >seq694 Length=40397 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| ||||| ||||| || | ||| ||||||||||| Sbjct 9042 AACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAG 9101 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| |||||||| || || ||||| || ||||| || ||||| || || || || Sbjct 9102 AAAGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCG 9161 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 |||||||| || || || ||||| ||||||| Sbjct 9162 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCAA 9195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718251839877960