Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq694 120 5e-22 >seq694 Length=40397 Score = 120 bits (132), Expect = 5e-22 Identities = 232/336 (69%), Gaps = 10/336 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | || ||| | || || Sbjct 9660 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 9601 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | || | | || ||||| || || || Sbjct 9600 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 9541 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| || | |||||||| |||| || ||||| ||||| ||||| || || || || || Sbjct 9540 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGA-GCG 9482 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| ||| | || || |||| ||||| ||||| ||||| ||||||| Sbjct 9481 CTTCAGCTC-CGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGA 9423 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314 | |||||| | |||||||| | ||||| || || |||| ||||||| |||| || Sbjct 9422 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCA 9363 Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACA 125349 ||| || | || || || ||||| ||||||| Sbjct 9362 AGCAGCGCACCTAC---CTGTTCAACGCCATCGACA 9330 Score = 116 bits (128), Expect = 5e-21 Identities = 289/433 (67%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || ||||||||||| ||||| |||||||| || || || ||||||| Sbjct 9199 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 9140 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||||||||| ||||||||||| || || | ||||| | || || || Sbjct 9139 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGT 9080 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGA 125605 || |||||| | ||| ||||||||| || ||||| ||||| ||| || | | Sbjct 9079 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCA--CATC-AAGT-CGAA 9024 Query 125606 GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACA 125665 | ||| || | || || |||| ||| ||| || || || || | Sbjct 9023 GCCCAGCCCCGAGGCTGTCGAGAGGATCATCAT------CGAGGCTGTCGATATCGAGAA 8970 Query 125666 AGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTG 125725 ||||| || || || | || || ||| | | |||||||| || ||| ||||| Sbjct 8969 GGAGTTCCTGACGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTG 8910 Query 125726 CGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---T 125782 | ||||||| ||||| || || || || |||| | | | | ||| ||||| Sbjct 8909 CCAGTACATCGAGTTCGTCGCTGACCG---CCTGTTGGTGGCGCTCGGCAACAAGAAGTA 8853 Query 125783 TTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAA 125842 |||||||||| || ||||| || |||||| | ||| || || || |||||||| Sbjct 8852 CTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAA 8793 Query 125843 CTTTTTCGAGAAG 125855 ||| ||||||||| Sbjct 8792 CTTCTTCGAGAAG 8780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741041701739640