Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq33 116 9e-21 >seq33 Length=265719 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || ||||| || || || | ||||| || || || || ||| Sbjct 39413 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGCCCGTCCTCCAGCTGCTTACCA 39354 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481 || || || || | ||| ||||| || || || || || || ||||||||| ||||| || Sbjct 39353 GCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 39295 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || ||| || ||| ||||| || || |||||||| ||||| || || Sbjct 39294 CACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTCTTTCCAGTCAGGGT 39235 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 39234 CTTGACGAAGATCTGCAT 39217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151370532920412