Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq33 93.3 4e-14 >seq33 Length=265719 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || || |||||| ||||||||||| || | | ||| ||||||| Sbjct 39426 CACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGCCCGTCCTC 39367 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||||||| || | || | ||||||||||||| ||| | || ||||||||| Sbjct 39366 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 39307 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||| | | | || || || |||| ||| || ||||| || || || Sbjct 39306 AATCTTGCTCTTCACGTTGTCG--ATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTC 39249 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || || || || || || |||||||| Sbjct 39248 TTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 39217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421241501875889