Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq340 96.9 5e-16 seq339 93.3 7e-15 >seq340 Length=20526 Score = 96.9 bits (106), Expect = 5e-16 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 8710 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCCA 8652 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| || |||||||| || ||||||||| |||| Sbjct 8651 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTC 8612 >seq339 Length=25275 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| |||||| || ||||||| ||||| Sbjct 1270 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTTATCCGTGATG 1211 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || |||||| |||| | ||||| | Sbjct 1210 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTTACCTCCTTGGACGTGGTCTACG 1151 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || | |||||||| | | || ||||| || ||||| Sbjct 1150 CCCTCAAGAGGCAAGGCCGCACCCTCTACGGTTTCGGTGGTTAA 1107 Score = 89.7 bits (98), Expect = 8e-14 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||||| | || || ||||| || || ||||||||||| || || Sbjct 1422 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATTCAGGGTATCACCAAGCCCGCCAT 1364 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||| ||||| || ||||||||| |||||| Sbjct 1363 CCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 1323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073472874077