Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq146 141 1e-28 seq694 100 4e-16 >seq146 Length=70891 Score = 141 bits (156), Expect = 1e-28 Identities = 298/440 (68%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||||||||| |||||| ||| || || || || | || ||||| | | | Sbjct 29955 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTC 30014 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || |||| | || || |||||||| ||||||||||||||||| ||||| || Sbjct 30015 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 30074 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | | | |||||| || || ||||| |||||||||||| | Sbjct 30075 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 30134 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 || || | ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 30135 ATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 30194 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | || ||||| || || || | | ||| ||||| | ||| ||| | Sbjct 30195 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCT 30253 Query 63438 A-TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63494 | | |||||||| || | || ||||| ||| ||||||| || | |||| ||| Sbjct 30254 AGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTG--AGA 30311 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || | || ||||| | ||||| || | |||||||||||||| Sbjct 30312 CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCG 30371 Query 63555 TCTATGCTATCATCGATCAT 63574 || |||||||| || |||| Sbjct 30372 TCGATGCTATCCTCCTTCAT 30391 >seq694 Length=40397 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || || || ||| ||||| ||||| || | ||| ||||||||||| Sbjct 9042 AACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAG 9101 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| |||||||| || || ||||| || ||||| || ||||| ||||| || || Sbjct 9102 AAAGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCG 9161 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 |||||||| || || || || || |||||||| || Sbjct 9162 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATCAG 9199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622932490659240