Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq146 271 2e-67 >seq146 Length=70891 Score = 271 bits (300), Expect = 2e-67 Identities = 1046/1612 (65%), Gaps = 42/1612 (3%) Strand=Plus/Minus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| |||||||| | || || ||| || | |||||||| || | | ||||||| Sbjct 30444 TGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAGG 30385 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| |||||| ||||||| |||||| || |||| || || | || ||||||| | Sbjct 30384 AGGATAGCATCGACGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCG 30325 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | || || || ||| | | ||| | ||||| || | || |||||| ||| Sbjct 30324 CTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGT-AGCTACATTGCTGGC 30266 Query 363748 ACAGGGGGATACTCGAATGGGCTGG-TTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| | | |||| | ||||||||||||| || | |||| ||||| | Sbjct 30265 ACCAATGGC-ACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCACG 30207 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||||||||| ||||| || || || || || || |||||||| Sbjct 30206 CTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATG 30147 Query 363867 TCATGCCGATATTTTTGAGTTTCTT-GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGC 363925 || ||||| || || |||||| | || || || || ||| || || |||||| | | Sbjct 30146 GCACGCCGACATCTTC-AGTTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 30088 Query 363926 GTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGG 363985 | || || || |||||||| || || ||| || |||| | || ||||| || || ||| Sbjct 30087 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAG- 30029 Query 363986 CAGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | ||| | || | ||||| |||| || || || || | ||||| | Sbjct 30028 CAGAACGGCACCTGGACCCTTATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTAT 29969 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || ||||| | | ||||| ||||| ||||||| |||||| | ||| |||| Sbjct 29968 GGAGACGAGTTCGAGGCTCTTTACGAGCAGTATGAGAAGGAGGGTCGTGGCCGTGAGACC 29909 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | | ||| |||||||| |||| ||||| | || | ||| | ||||| || | ||| Sbjct 29908 GTCCGCGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAATCCC 29849 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| ||||||| ||| |||||||||||| |||||| || |||||||||| | | Sbjct 29848 TTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACGA-T 29790 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| |||||| || |||||| | || ||||| || || || ||| || || Sbjct 29789 CCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCTGT 29730 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTTGA 364337 || ||| | || ||| | || || ||| | || || || | | ||| | || Sbjct 29729 CTGCAACTTGGCCTCGCTGGCTCTCCCGACCTTCGTCAACGTTGAGAACGGTGTCTACGA 29670 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA-ATCTCG-ACAAGGTTATC 364395 | | || | ||| | || || ||| | |||| | || | | || | ||||| | ||| Sbjct 29669 CTTCAAGAAGCTTCACGAGGTTACCCA-GGTGCT-CGTGAAGAACTTGAACAAGATCATC 29612 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || | || || | || || ||| || | | || |||||||| ||||| || Sbjct 29611 GACATCAACCACTACCCGGTGCCCGAGGCCAGAAAGAGC-AACATGCGTCACCGCCCCAT 29553 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | | ||||| | || || || || | || || || ||| | || ||||| Sbjct 29552 CGCAGTGGGTGTCAACGGTCTTGCCGATGCCTTCCTGGCTCTTCGCATGCCTTTCGATTC 29493 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 ||||| || || || | |||| || || || || || ||| | || || Sbjct 29492 CCCTGAGGCCAAGCAGCTCAACATCCAGATTTTCGAGACCATCTACCATGCATCCATCAC 29433 Query 364575 TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GTCC--C 364630 ||| ||| |||| | || || | | || ||| || | |||| |||| | Sbjct 29432 TGCCTCGATTGATCTTGCCAAGCTCCATGGTCCCTACGAGACCTTCCAGGGCAGTCCTGC 29373 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA---- 364686 |||| ||||| | | |||| || | ||||| || | | || | |||| Sbjct 29372 CTCT----CAGGGCATCCTGCAGTACGACATGTGGAA---CAAGGC-TCCGACCGACCTT 29321 Query 364687 TGGAACTGGGATA-CGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| ||||||| | || | | | | || |||| || | |||||||| || | Sbjct 29320 TGGGACTGGGACAGCGTGAAG-GCTGAGATTGCTCAGCACGGCATCCGCAACTCTCTGCT 29262 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 || ||||||||||| || || || ||||||||||| ||||||||| ||||| Sbjct 29261 CGTCGCACCCATGCCCACCGCGTCGACCAGTCAGATCCTCGGCTTCAACGAGTGTTTCGA 29202 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 |||| || || | || || ||||| || || | || || || | ||| || || Sbjct 29201 GCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTCCAGGTCGTCAA 29142 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACT 364924 | || ||||||| | ||||| ||| |||||| ||| ||| ||||||||| Sbjct 29141 CCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCTGATCAG-ATGAAGAACC 29083 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 |||||||| | || ||||| | ||| | || || |||| || || | ||| Sbjct 29082 GCATCATCGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCGACGACATCAAGG 29023 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | | ||||| || || ||||| |||| ||| || || | | ||||| ||||||| Sbjct 29022 CGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGCACCATCGTCCAGATGGCTGCCGATC 28963 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | ||||| || || ||| ||| ||| | ||| | ||||| | || || | Sbjct 28962 GGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCACATGAAAGACCCTACGATGG 28903 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || || ||||| || || ||||| |||||| ||||| || Sbjct 28902 GCAAGATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGG 28851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303322055177198