Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq33 176 8e-39 seq694 152 9e-32 seq97 143 5e-29 seq397 109 1e-18 seq313 96.9 6e-15 seq146 86.0 1e-11 >seq33 Length=265719 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| ||||| ||| | || ||||| || |||||||| || || ||| Sbjct 39215 CCACCGCGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 39156 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || || Sbjct 39155 AGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 39096 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| | ||| || ||||| ||||| | ||| || ||| Sbjct 39095 ATGCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACTCGACT 39036 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || || ||||||||||||||||| || ||||| Sbjct 39035 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 38989 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || || ||||| || |||||| Sbjct 39443 CCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 39384 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||| || || | |||||| || ||||| ||||| | || || || || || Sbjct 39383 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 39324 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| ||| ||| ||||| ||||| | ||||| || Sbjct 39323 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACC 39264 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || ||||| || |||||||||||||| |||||||| Sbjct 39263 TCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 39217 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || |||||||| || ||||| Sbjct 38704 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 38645 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || ||| Sbjct 38644 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 38585 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||||| ||||||||||| | || || || Sbjct 38584 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 38525 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 38524 TCAAGGGTGATGGTCTTGCCGGTGA 38500 Score = 125 bits (138), Expect = 1e-23 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || |||||||| || |||||||| || ||||| Sbjct 38987 CCACCACGGAGGCGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 38928 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || ||||| || || Sbjct 38927 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 38868 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||||| ||||| ||||||| || || || Sbjct 38867 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGAGGACTCGACC 38808 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 || | ||||||||| || || || | || ||||| || ||||| ||| || Sbjct 38807 TCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG----TCAGCATTTTGCGAT 38757 >seq694 Length=40397 Score = 152 bits (168), Expect = 9e-32 Identities = 316/468 (68%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || || |||||||||||||| |||||| Sbjct 8747 CATGACGCCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCT 8806 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| |||||| |||||||||||| |||||||| |||| | | ||| || || Sbjct 8807 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 8866 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | ||||||||| ||||||||||||||||||| ||| || | || Sbjct 8867 GAGCGCCACCAACAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATT 8926 Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| | | ||| || || | || || | ||| ||||| ||| | |||| | Sbjct 8927 CATGCCGAGAAGAGCGACA-GGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAG 8985 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 | || || ||| |||| || | || || |||| || || | ||| ||| Sbjct 8986 CCTCGATGATGATCCTCTCGACAGCCTCGGGGCTGGGCTTCGACTTGATGTGCGAGAACA 9045 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || |||| | ||| | |||||| || ||| |||| |||||||| ||| Sbjct 9046 GCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAGAAAG 9105 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 |||||||||||||| || || || |||||||| |||| | ||| || ||| || Sbjct 9106 TGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGA 9165 Query 10354 ACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | | | |||||| ||| | |||| | || ||| |||||||| Sbjct 9166 AGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG 9213 >seq97 Length=191658 Score = 143 bits (158), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 153509 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 153450 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| |||||| ||| Sbjct 153449 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 153390 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 153389 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 153331 >seq397 Length=68823 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225772 GTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAG 225831 ||| | ||| || || ||||| || ||| || || || | |||||| ||||| || Sbjct 64080 GTCGAGGTCATGCTCGACGTAGACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAG 64021 Query 225832 CTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAG 225891 ||| | || || ||||| | |||||| ||||||| | |||||||| |||| || Sbjct 64020 CTGCTCGTTGTTGATGGCACGCATCAGGGTGGTCTTGCCGGAACCGTTGGGGCCGAGCAG 63961 Query 225892 GCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACC 225951 |||||| | | || ||||| | ||| | || ||| || ||||||||| |||| Sbjct 63960 ACCGTAACGCTGACCACGCTTCAGACGAAGGTGGGTCTGGTTAAGCAGGATCTTGGCACC 63901 Query 225952 ATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||| |||||||| ||| | ||| || |||||||||||||| Sbjct 63900 GTAGGCCAGGGAGAAGGTGCAGTTGCAAAGATCCTCACCCTCCTC 63856 >seq313 Length=63811 Score = 96.9 bits (106), Expect = 6e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 224975 GCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGG 225034 || || |||||||| | |||||||||||| ||| | |||| ||| |||| | || | Sbjct 31686 GCGTAACGCCACTGCAAGTACTGGTTGGGCGTCTTCTCCATGTGCATCTCGACGTGCTCA 31745 Query 225035 AAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGA 225094 | ||||||||| | ||| | || |||| ||| || |||||| || ||| | Sbjct 31746 AGAGCATGCTGCTTGATGTAACCAATACGCAGGTTAGGGTGCTTCTCGACCTTGCC---A 31802 Query 225095 GT---CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTG 225151 || ||| | ||||| || ||||||||||||||||||| |||||| ||||| ||| Sbjct 31803 GTTTGCGGAATGACTTCGCCAGTCAGGACCTTGATGAGCGTAGACTTGCCAGCACCGTTG 31862 Query 225152 GGGCCAATCACGCCAATCCGGGATGACA 225179 | ||||| | | | | ||||| |||| Sbjct 31863 GCACCAATAATGGCGACACGGGAGGACA 31890 >seq146 Length=70891 Score = 86.0 bits (94), Expect = 1e-11 Identities = 154/224 (69%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 31451 GTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTCCTG 31510 |||||| | ||||||| | || || ||||||||||| || | ||| | || Sbjct 29471 GTTGAGCTGCTTGGCCTCAGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGC 29530 Query 31511 AAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCGCCTCGGG 31570 |||||| | |||||||||| | || ||||| | |||||||| || | | |||||||| Sbjct 29531 AAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGG 29590 Query 31571 AATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCAGAATCT---TCAC 31627 | | |||| ||| ||| ||| |||||| | |||||| | || | || | || Sbjct 29591 CACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAAC 29650 Query 31628 GTGCTTGCGAAGGTCCTCAAAGTCGTAGGCACCGTTCTTGACGT 31671 || | |||| | || ||||||||| ||||||||| |||| Sbjct 29651 ---CTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGT 29691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921600638191080