Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq694 315 1e-80 seq146 277 3e-69 seq247 98.7 2e-15 >seq694 Length=40397 Score = 315 bits (348), Expect = 1e-80 Identities = 612/907 (67%), Gaps = 69/907 (8%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| || |||||||||||||| Sbjct 9660 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 9601 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | || || |||| || ||| || Sbjct 9600 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 9541 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || |||||||||||||| || || ||||| || || |||||||| | | | Sbjct 9540 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 9481 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 9480 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 9421 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| | || || |||||||||| || ||| Sbjct 9420 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAAG 9361 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGA--------------------CGATGC--- 42633 |||| | | |||||||| ||||| || | |||||| Sbjct 9360 CAGCGCACCTACCTGTTCAACGCCATCGACAACAGTATGATACACCCCACCCGATGCTAT 9301 Query 42634 ------------------------------CCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 |||||||||||| |||||| |||||||| | Sbjct 9300 GGAGCATTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTC 9241 Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | ||||||| | | | || | | || |||| | | ||| | ||||| ||||| Sbjct 9240 TGCGCTGGATCT-GCGACAAGAACTCGACCTTCGCATCGCGTCTGATTGCCTTCGCCGCC 9182 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGT 42781 |||||||| ||||||||| ||| |||||||||||||||||||||||||| || ||| Sbjct 9181 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 9122 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| ||||| ||||| ||||||||||| | | || ||||| |||| | Sbjct 9121 CTC-ATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAGGGCATGCACAC 9063 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||||||||| ||||||||| ||| ||| | |||||| ||| || Sbjct 9062 CGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGAGGCTGT 9006 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | | ||||||| ||||| || || ||||||||||||||||| ||| | ||||||| Sbjct 9005 CGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 8946 Query 42962 CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 || | || |||||||||| ||||| ||||||||| |||||||| ||| |||||| Sbjct 8945 TGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTACATCGAGTTCGTCGCT 8888 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 |||| || | ||| | | | || || ||||||| | | ||||||||| Sbjct 8887 GACCGCCTGTTGGTGGC-GCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 8829 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| ||||||||||| ||| | |||||||||||||| ||||||||||| || | || Sbjct 8828 CTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 8769 Query 43139 CTACCAG 43145 ||||||| Sbjct 8768 CTACCAG 8762 >seq146 Length=70891 Score = 277 bits (306), Expect = 3e-69 Identities = 1088/1692 (64%), Gaps = 63/1692 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| || || ||||||||| || | |||||||||||||| |||||||| | Sbjct 28804 TGAACTGGATTGGCGCAGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 28863 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | | |||||| | ||| | ||| |||| | ||||| | Sbjct 28864 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATCTTGCCCATCGTA------GGGTCTT 28917 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | || |||||| || ||| |||||| | ||||| |||| || || | Sbjct 28918 TCATGTG------GATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 28971 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| || || ||| | |||||| | ||| | |||||||||||| | ||||| | Sbjct 28972 CCATCTGGACGATGGTGCG-CTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATG 29030 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | ||||| | ||| | ||| | || || ||| |||||| || | | Sbjct 29031 TCGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTC 29090 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096 || | ||| ||||||||| | | ||| ||| || || ||| | || || Sbjct 29091 ATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGA---GGAGCCAGGGGTTGACG 29147 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| ||||| || | |||||| ||||| ||||| ||| || |||||||| Sbjct 29148 ACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 29207 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| || ||| || ||||| || ||| || |||||||| | || |||||| Sbjct 29208 CACTCGTTGAAGCCGAGGATCTGACTGGTCGACGCGGTGGGCATGGGTGCGACGAGCAGA 29267 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTC-GTTCCAGTCCCACATGCC 244275 ||| | | ||||||| | | | | || || | | || ||||||||| | | | Sbjct 29268 GAGTTGCGGATGCCGTGC-TGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTC 29326 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 |||| || || | ||||||||| ||||||| | |||| | | || Sbjct 29327 -----GGTCGGAGCCTT----GTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGG 29377 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC--- 244392 ||||||| | ||||| ||||||||| | | ||| ||| || | | || | | Sbjct 29378 ACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAA---TCGAGGCAGT 29434 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || || | ||||||||||||||| ||| |||| | | ||||| | | Sbjct 29435 GATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCAGGGGA 29494 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| | || |||| | ||||| || || | || || | |||| Sbjct 29495 ATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGAT 29554 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| | ||| ||| ||||| |||| |||||||| ||||| |||| |||||| Sbjct 29555 GGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 29614 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | |||||| | ||| || || || || ||| ||| || |||||||| Sbjct 29615 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 29674 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | | ||| || || || | ||| ||| || | ||||| Sbjct 29675 GACACCG---TTCTCAACGTTGACGA--------AGGTCGG-GAGAGCCAGCGAGGCCAA 29722 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | ||||||| ||| |||||| ||| ||||| Sbjct 29723 GTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGA 29782 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || ||| || || |||| || || ||| |||| ||||||| |||||||| || Sbjct 29783 GCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAG 29842 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| |||||||||| |||||| |||| | | || |||||| | | ||| Sbjct 29843 CATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGC 29902 Query 244873 CTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 ||| ||| || ||| | ||||| ||| || | ||| || |||||||||| Sbjct 29903 GCGGACGGTCTCACG-GCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGCCTCGAACT 29961 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 || || | || || | || || |||||| |||||||| || |||| || Sbjct 29962 CGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTCCAGGTGC 30021 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | | ||||||||| || || |||||||| || | ||| ||||| | Sbjct 30022 CGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGC 30081 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | || || ||| ||| |||||| | || || | || |||| |||| Sbjct 30082 GAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAGATGTCGG 30141 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| |||| ||| || || ||||||||||| |||||||| | Sbjct 30142 CGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAA 30201 Query 245172 C-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT-AGAGTGGCC 245229 | | | | | | |||| ||| ||| || | || | | |||||| ||| ||| Sbjct 30202 CGTAGCGTGCAGTG-TTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGT-GCC 30259 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTA 245285 |||||||| |||||| || || | | || ||| | || |||| || | Sbjct 30260 ATTGGTGCCAGCAATGTAGCTACCAGTGGCAC---GGATGC-GGTGAACATTGAGACCGA 30315 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || ||| ||||||||| | ||||||| |||||| |||||| || || || | Sbjct 30316 TGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGTCGA 30375 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||| ||| |||||| | || || ||||| || | || ||| ||||||||| | | | Sbjct 30376 TGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAG 30435 Query 245406 AGTTGAACAGAG 245417 ||||||||||| Sbjct 30436 CGTTGAACAGAG 30447 >seq247 Length=134264 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002 ||| | ||||||||| | ||||| |||||||| |||||||||||| |||||||| | | Sbjct 73508 ATGCGTTTCCCGGACCGCACCACGCCGATCGGCCAGATGATCAACGCGTACCTGACCGGC 73449 Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062 |||||| | ||| || |||||| | || || || ||||| || || || |||||||| Sbjct 73448 GCGAGCGAGCAGGAAGACCACGTCATCCATCTACTCTTCTCAGCAAATCGTTGGGAAGCT 73389 Query 243063 GC 243064 || Sbjct 73388 GC 73387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944316901790640