Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq33 136 9e-27 seq694 89.7 1e-12 seq97 86.0 1e-11 >seq33 Length=265719 Score = 136 bits (150), Expect = 9e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| ||||||||| ||||| || | || || || |||||| Sbjct 39407 TCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAG 39348 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || |||||||| ||| ||||| || || || ||||| || || ||| |||||||| Sbjct 39347 ATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTT-GCTCTTCACGTT 39289 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| || ||||||||||| ||||| || ||||| |||||||| Sbjct 39288 GTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGAC 39229 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 39228 GAAGATCTGCAT 39217 Score = 104 bits (114), Expect = 6e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||||| ||| || || ||||| || ||||||| Sbjct 38704 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 38645 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||||| ||||| || || Sbjct 38644 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 38585 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| ||||||||||| || ||| || ||||| || || | ||| ||| || || Sbjct 38584 ATGCCTTCCTTATCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCGGACGACTCGAC 38526 Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| Sbjct 38525 CTCAAGGGTGATGGTCTTGCCGGT 38502 Score = 104 bits (114), Expect = 6e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | ||||| || || | || || || ||||| || |||| Sbjct 39219 CATG-CCACCGCGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGT 39161 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | ||| || || ||||| || | || || || ||||||||||||||||| || Sbjct 39160 CCGAGAGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCG 39101 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || || ||||| || | || || || || || | || || | Sbjct 39100 GGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACT 39041 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| | ||||| ||||| ||||| || ||||||||||| || ||||| Sbjct 39040 CGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 38989 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| || || ||||| || ||||||| Sbjct 38987 CCACCACGGAGGCGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 38928 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || |||||||||| ||||| || ||| Sbjct 38927 AGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 38868 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| ||||||||||| || ||| || ||||| || || | || || || || Sbjct 38867 ATGCCTTCCTTATCCTGGATCTT-GCTCTTGACGTTGTCGATCGTGTCTGAGGACTCGAC 38809 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || ||||| ||||| || |||| || ||||| Sbjct 38808 CTCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG 38772 >seq694 Length=40397 Score = 89.7 bits (98), Expect = 1e-12 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||||||| |||||| || || ||||| ||||| ||||| || | || Sbjct 8934 TCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGTTGG 8875 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAA 269272 ||| ||||| | |||| ||||| | | || ||||||| ||| ||||| | Sbjct 8874 TGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACA 8815 Query 269273 TTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 |||||||| || ||||| ||||||||||| |||||||| | ||||| || Sbjct 8814 TTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 8763 >seq97 Length=191658 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || ||||| || || || | || || || ||||||||| Sbjct 153509 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 153450 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || ||||| || || ||| || || || || |||||||| || ||| || || || Sbjct 153449 AGGCGCTGCTGG---TCCGGGGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACATT 153394 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || ||||| ||||| ||||| || || || |||||||| Sbjct 153393 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 153334 Query 288462 GAA 288464 ||| Sbjct 153333 GAA 153331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179625849045742