Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq694 109 1e-18 >seq694 Length=40397 Score = 109 bits (120), Expect = 1e-18 Identities = 168/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||| || || || || | ||| ||||| ||| | || || | || || || Sbjct 8998 ATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC-TGTCGC 8940 Query 243562 -CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| | |||||||| | |||||| | ||||||||||| ||||| || |||||| | Sbjct 8939 TCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCT 8880 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || | ||||| || | |||| |||||| ||| |||||||| | ||| ||||| Sbjct 8879 GTTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGA 8820 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | ||||||||| || || || ||||||||||| |||||||| |||| || || Sbjct 8819 GAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 8763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102853307202150