Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq146 268 9e-67 >seq146 Length=70891 Score = 268 bits (296), Expect = 9e-67 Identities = 507/736 (69%), Gaps = 10/736 (1%) Strand=Plus/Minus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 ||||||||||| || ||||| ||| ||| || | || || ||||| || | ||| Sbjct 30445 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAG 30386 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | || |||| ||| || | |||| ||||||| ||| || | ||||| || | Sbjct 30385 GAGGATAGCATCGACGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAGACC 30326 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| ||| ||| ||| | | ||||||| ||| |||||| || Sbjct 30325 GCTGGAGGCATCGGTCTCAATGTTCACCGCATCCGTGCCACTGGTAGCTACATTGCTGGC 30266 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||||||||| ||||||| | | || ||||| || |||| ||||||| | || ||| Sbjct 30265 ACCAATGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCACGC 30206 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| ||||||||||| | | | |||| | ||||| |||| |||||||| ||| Sbjct 30205 TACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATGG 30146 Query 94204 CACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261 ||||| ||| | ||| |||| |||| || || |||||||||||||| || | Sbjct 30145 CACGCCGACATCTTCAG--TTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 30088 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 |||| | ||||| ||||||||||||||| | || || || || |||||||| |||||| Sbjct 30087 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGC 30028 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 | ||| | |||||| ||| | || ||||| || || || || ||| | || |||| || Sbjct 30027 AGAACGGCACCTGGACCCTTATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATG 29968 Query 94382 GA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGGAAGGT 94439 || || | || || | | || | | || || | |||| | |||| | || Sbjct 29967 GAGACGAG-TTCGAGGCTCTTTACGAGCAGTATGAGAAGGAGGGTCGTGGCC-GTGAGAC 29910 Query 94440 TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCC 94499 | ||| |||||| ||| | || | || | ||||| ||||| |||| || Sbjct 29909 CGTCCGCGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACCGGTAATCC 29850 Query 94500 CTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558 || ||| ||| |||||| | ||| |||| |||| |||||| || |||| || || Sbjct 29849 CTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGA 29791 Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618 || ||||| || || ||| |||||| |||||||| ||| | || || ||| | |||| Sbjct 29790 TCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCTG 29731 Query 94619 TGTGTAACCTGGGCTC 94634 | || ||| ||| ||| Sbjct 29730 TCTGCAACTTGGCCTC 29715 Score = 125 bits (138), Expect = 7e-24 Identities = 203/287 (71%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || || ||||||||||| || || || |||||||| ||| |||| Sbjct 29272 AACTCTCTGCTCGTCGCACCCATGCCCACCGCGTCGACCAGTCAGATCCTCGGCTTCAAC 29213 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | ||| || ||| | ||| | || ||||| || || || ||| Sbjct 29212 GAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTC 29153 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267 | ||| ||||| ||||| |||| || || | || || ||||| ||| | Sbjct 29152 CAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGAC-CTCGGCCTGTGGTCTGATCA 29094 Query 95268 GGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 | | ||||||| | | ||| ||||||| ||| ||||| | ||||| | || || | Sbjct 29093 GATGAAGAACCGCATCAT-CGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCG 29035 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | ||||||||||||||||||||||| || |||||| | | |||||| Sbjct 29034 ACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC 28988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494711518348440