Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq694 174 2e-38 seq146 168 7e-37 seq33 114 1e-20 >seq694 Length=40397 Score = 174 bits (192), Expect = 2e-38 Identities = 302/434 (70%), Gaps = 9/434 (2%) Strand=Plus/Minus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||||||| |||||||| | || || |||| ||| ||| ||||||| | | Sbjct 9193 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTC 9134 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | |||||||| || || ||| |||||| | || || || || || Sbjct 9133 AAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAG 9074 Query 52527 GGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGAC--CGAAAAATTGG 52584 || ||||||| |||||||| ||||| | | ||| | | | |||| | Sbjct 9073 GGCATGCACACCGACTTTGCCTGCCTGCTGTTCT---CGCACATCAAGTCGAAGCCCAGC 9017 Query 52585 ATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTA 52644 | || | || ||| || ||| ||||| || | |||||| |||||||| | | Sbjct 9016 C--CCGAGGCTGTCGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGA 8959 Query 52645 CGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCG 52704 ||| |||||||| |||| || || |||||||| || | ||||||| ||||||||| Sbjct 8958 CGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCG 8899 Query 52705 AGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGC 52763 |||| || || || || ||||||||| |||||| || | | ||||||| |||||| | Sbjct 8898 AGTTCGTCGCTGACCGCCTGTTGGTGGCGCTCGG-CAACAAGAAGTACTACAACGCCACC 8840 Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823 || || || || || ||| | ||||||||||| |||||||||||||| ||||||||| Sbjct 8839 AACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAG 8780 Query 52824 CGAGTCGGCGAGTA 52837 || || || || || Sbjct 8779 CGTGTTGGTGACTA 8766 >seq146 Length=70891 Score = 168 bits (186), Expect = 7e-37 Identities = 736/1139 (65%), Gaps = 29/1139 (3%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| |||| ||| || | | || | || ||| | | Sbjct 29140 GGTTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACG 29199 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || | ||||| ||| || || ||| || | ||||| |||||| || | Sbjct 29200 GCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGACGCGGTGGGCATGGGTGCGA 29259 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCC-TGCCAATCC 153206 | | || ||| || || | ||||||| ||| || |||||| ||| | ||| ||| Sbjct 29260 CGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTCA-CGCTGTCCCAGTCC 29318 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | | ||| | | |||||||||||||||||| | | || || ||| ||| Sbjct 29319 CAAAGGTCGGTCGGAGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGA 29378 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTC-GAG 153325 ||||| || || |||| || | | | | ||| || || | | || | || Sbjct 29379 CTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCA-ATCGAGGCAGTGAT 29437 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTC 153383 | ||| ||| ||||| ||| || || | ||||| | || || || | Sbjct 29438 GGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAG--CTGCTTGGCCTCAGGGGAA 29495 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || ||||| ||||| ||||| | || ||| || ||||| Sbjct 29496 TCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATG 29555 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT-ATGGGATAGTGATTGCGATCGAT 153502 || || || | |||||| || || |||| | || ||||| ||| ||||| Sbjct 29556 GGGCGGTGACGCATGTTGCTCTTTCTGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGAT 29614 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || ||||| | ||| ||| | ||| | || | | | | ||| |||| ||| || || Sbjct 29615 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 29674 Query 153563 GGT-CATTTCGTCGACGCGTACGCA--TCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 | | ||| || ||| ||| | ||| | || | || |||| || ||||| Sbjct 29675 GACACCGTTC-TCAACGTTGACGAAGGTCGGGAGA--GCCAGCGAGGCCAAGTTGCAGAC 29731 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| || | | | |||||| ||||||||| ||| |||||| || || Sbjct 29732 AGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGAT 29791 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | || ||||| ||||| ||||| || ||| | |||||| | || Sbjct 29792 CGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGG 29851 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCTGCGCTCGCACCC 153798 ||||||||||| || | |||| || | || || | ||| || || || Sbjct 29852 ATTACCGGTCTCGACCTGGGCCTCGAGAATGG-CGTACCAGAGCTTCTGAGCGCGGACGG 29910 Query 153799 GCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGT 153858 || || || ||||| |||| || ||||||| || ||| |||||||| || | Sbjct 29911 TCTCACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGCCTCGAACTCGTCTCCAT 29970 Query 153859 AGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT-CGGCG 153917 | || || || || || |||| | || ||||| || | ||| | ||| | || Sbjct 29971 AAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTCCAGGTGCCGTTCTGC- 30029 Query 153918 TTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 153977 | ||| ||| |||||| ||||| || | |||||| ||||| | |||||||| ||| | Sbjct 30030 TCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGG 30089 Query 153978 CAATCCTCCGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTGCC 154035 |||||| ||| ||| || | |||| ||| | || ||||||||||||||| Sbjct 30090 ACTTCCTCCTTGCCGTGGTTC--TTGCGAAGATCGAGGAAACTGAAGATGTCGGCGTGCC 30147 Query 154036 AGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGC 154092 | || || | ||||| ||| | |||||| |||| || || ||||| || |||| || Sbjct 30148 ATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGC 30207 Query 154093 GCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC-GGTGCCGTTGGT 154150 | | | |||||| ||||||| | |||||| || |||| |||| ||||| ||||| Sbjct 30208 GTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCATTGGT 30265 >seq33 Length=265719 Score = 114 bits (126), Expect = 1e-20 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| | || || || | | |||||||| ||||||||||||||| Sbjct 39444 GCCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 39385 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || ||| |||||| || || ||||| | |||| |||||||| || ||||| || Sbjct 39384 GAGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGG 39325 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | || | || | ||| || | ||||||| || || Sbjct 39324 GATACCCTCCTTGTC-CTGAATCTTGCTCTTCACGTTG-TCGATCGTGTCGGAAGATTCA 39267 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||||| ||| | || || |||||||| || || || || ||||||||| Sbjct 39266 ACCTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 39216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250682004080