Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq33 104 2e-17 seq694 102 8e-17 seq97 98.7 9e-16 >seq33 Length=265719 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || ||||| || ||||| ||||| ||| Sbjct 39443 CCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 39384 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || |||||| |||| | ||||||||||| || || Sbjct 39383 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 39324 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||| | |||| |||| ||||| | | || || Sbjct 39323 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACGTTG-TCGATCGTGTCGGAAGATTCAAC 39265 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | || || || ||||| || || || || ||||||||| Sbjct 39264 CTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 39216 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | |||| |||| || | || ||||| || || || ||||| || Sbjct 39215 CCACCGCGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 39156 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| || || ||| |||||| |||||||| || || || Sbjct 39155 AGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGG 39096 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| ||| || ||| | | |||| ||||||| ||||||| Sbjct 39095 ATGCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACTCGACT 39036 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || |||||||| || || || || || || ||||| Sbjct 39035 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 38989 >seq694 Length=40397 Score = 102 bits (112), Expect = 8e-17 Identities = 293/445 (66%), Gaps = 13/445 (3%) Strand=Plus/Minus Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198 ||| |||| || |||||| ||||||||| |||||||| ||| ||| || | || Sbjct 9202 CGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATC 9143 Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258 || | | || | || | |||||||| ||||| || |||||| || || || Sbjct 9142 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCC 9083 Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-CTACTACAACAC-TAGAGTCGATC 47316 | || || ||| |||||||| |||||||||| || || | ||| | |||||| Sbjct 9082 CGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAG 9023 Query 47317 AAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGG 47376 || || | | || || ||| | ||| || |||| || |||| || Sbjct 9022 CCCAGCCC--CGAGGCTGTCGAGAGGATCATCAT---CGAGGCTGTCGATATCGAGAAGG 8968 Query 47377 AGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAA 47436 |||| | | || || ||||| | || | | || ||||| || | | ||| | Sbjct 8967 AGTTCCTGACGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCC 8908 Query 47437 AGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACC 47496 |||||||||| || ||||| ||||||||| | || ||| | ||||| ||| Sbjct 8907 AGTACATCGAGTTCGTCGCTGACCGCCTGTTGGTGGCGCTCGGCAA---CAAGAAGTACT 8851 Query 47497 ACACCGAGA---ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553 ||| || | | || ||||| || ||| | |||||||||||| ||||||||||||| Sbjct 8850 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACT 8791 Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578 | ||||||||||| || || || || Sbjct 8790 TCTTCGAGAAGCGTGTTGGTGACTA 8766 >seq97 Length=191658 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 153509 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 153450 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 153449 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 153390 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||||| |||||| |||| ||| | || ||||| || || || || || || Sbjct 153389 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 153331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489572237360