Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq33 100 3e-16 >seq33 Length=265719 Score = 100 bits (110), Expect = 3e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || |||||||| | | || ||||| || || || ||||| ||||| || || ||| Sbjct 38707 ATACCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 38648 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | ||||| || ||||||||||| Sbjct 38647 GACAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGA 38588 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| ||||| || || || |||| || | || | ||||||||| ||||| Sbjct 38587 GGAATGCCTTCCTTATCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCGGACGACTC 38529 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||| || || || | || |||||||| Sbjct 38528 GACCTCAAGGGTGATGGTCTTGCCGGT 38502 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | || || || |||| || || ||||| ||||| || || || Sbjct 39218 ATGCCACCGCGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCC 39159 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | || |||| || || || ||| | |||| || ||||||||||| Sbjct 39158 GAGAGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGG 39099 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || ||||| || || || | || | ||||| || |||||| Sbjct 39098 GGGATGCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACTCG 39039 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | || |||||||| || || || || || |||||||| Sbjct 39038 ACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 38989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992527074440