Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq33 127 5e-24 seq97 105 2e-17 seq316 95.1 3e-14 >seq33 Length=265719 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| | |||||||||||| |||| ||||||||| | | || Sbjct 39209 CGCAGACGCAGTACCAGGTGCAAAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTA 39150 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || ||||||||||| || |||||||| ||||||||||||||||| || || Sbjct 39149 CGACCGTCCTCCAGCTGCTTACCCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCC 39090 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || |||| ||||| | || || || ||||| Sbjct 39089 TCCTTGTCTTGGATCTTGGACTTAACATTGTCGATTGTGTCCGATGACTCGACTTCCAAG 39030 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || ||||| Sbjct 39029 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTG 38992 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| |||||||||||||| || | ||||||||| | | || | || || Sbjct 39428 AGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGCCCGTCC 39369 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || |||||||||||||||||||| ||||| || || || ||| Sbjct 39368 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCC 39309 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | ||| || || | |||||| ||| Sbjct 39308 TGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAGCGTGATAGTC 39249 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 39248 TTTCCAGTCAGGGTCTTGACGAAGATCTG 39220 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || |||||||| |||| ||||||||| | || || | ||||| Sbjct 38689 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 38630 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||||||| ||| ||||| ||| Sbjct 38629 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCC 38570 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 38569 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTC 38510 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 38509 TTGCCGGTGA 38500 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||| | || || | ||||| Sbjct 38972 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 38913 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | |||||||||||||| || ||||| ||| Sbjct 38912 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTATCC 38853 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||||| | || || || | ||||| ||| Sbjct 38852 TGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGGGTGATGGTC 38793 Query 199598 TTACCCGT 199605 || || || Sbjct 38792 TTGCCAGT 38785 >seq97 Length=191658 Score = 105 bits (116), Expect = 2e-17 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | || || | ||||| || |||||||| |||||||||| Sbjct 153511 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 153452 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || |||||||||||||| ||| || || ||||| ||||| ||| || | Sbjct 153451 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 153392 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| |||||||| || || || | Sbjct 153391 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 153332 Query 199620 A 199620 | Sbjct 153331 A 153331 >seq316 Length=54270 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || |||||||| |||| ||||||||| | | || Sbjct 51611 CGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 51670 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||| || |||||||| || |||||||| ||||||||||||||||| Sbjct 51671 CGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGG 51720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178893066781563