Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq694 298 5e-76 seq33 141 9e-29 seq97 127 2e-24 seq316 86.0 6e-12 >seq694 Length=40397 Score = 298 bits (330), Expect = 5e-76 Identities = 617/915 (67%), Gaps = 76/915 (8%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| |||||| || || || || || || ||||| || || || || || || Sbjct 8747 CATGACGCCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCT 8806 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 | |||||| | ||| || || |||||||||| | |||||||| ||| | |||| Sbjct 8807 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 8866 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766 || | | || | ||| | ||| || |||||||||||||| || ||||| | | || Sbjct 8867 GAGCG---CCACCAACAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGC 8923 Query 132767 AATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 | | | | || || ||| || |||||||| || || || || | |||||| ||| Sbjct 8924 ATTCATG-CCGAGAAGAGCGACAGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGA 8982 Query 132827 CCGCGTCGGTGACGATT-TCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CT 132883 | || ||| ||| ||| || | | || | | | ||| ||| || || ||| | Sbjct 8983 CAGCCTCGATGATGATCCTCTCGACAGC-CTCGGGGCTGGGC--TTCGACTTGATGTGCG 9039 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 ||||| || ||| ||||||||| |||| |||||| || | |||||||||||||||| Sbjct 9040 AGAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGG 9099 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 |||||| | ||||||||||| ||||| || |||||||| || |||| |||||| || Sbjct 9100 AGAAAGTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGC 9159 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | ||||||| ||||||||||| ||||| || | ||| ||| |||| || | | Sbjct 9160 CGCTGAAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGT 9219 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT-TCTT--------------TGA 133108 ||| | |||||||||||| ||||| |||||||| |||| ||| Sbjct 9220 TCTTGTCGCAGATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAACTATGA 9279 Query 133109 CGC------------------ACGGCATCG--------------------TTTCGATGGC 133130 ||| | |||||| | |||||||| Sbjct 9280 CGCGTTAGTGATCAATGCTCCATAGCATCGGGTGGGGTGTATCATACTGTTGTCGATGGC 9339 Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAA 133188 ||| |||| | || | | || | || ||| | ||| |||||||||||| ||| Sbjct 9340 GTTGAACAG--GTAGGTGCGCTGCTTGGGCTCGCTAATGTACGTGTCGATGAGGAGCGAG 9397 Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 || | |||||||| | ||||||||| ||| || |||||||| ||||| || |||||| Sbjct 9398 TAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCG 9457 Query 133249 ACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCT 133307 | ||| || || |||| ||| |||||||| || || ||||| |||||||| || Sbjct 9458 GGGATCTGGACCTC-GGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGA 9516 Query 133308 GGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC-- 133365 |||||||| ||||| || ||||| |||||| |||||||| |||||| | |||| Sbjct 9517 CGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTT 9576 Query 133366 -TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 | ||||||| | ||||||||| ||||| | |||||| | ||||| || || ||||| Sbjct 9577 GTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAAGAAGCCTC 9636 Query 133425 GGCTTTTTTGTACAT 133439 ||| || |||||||| Sbjct 9637 GGCCTTCTTGTACAT 9651 >seq33 Length=265719 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| | | Sbjct 38989 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 39048 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 39049 GACACAATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 39108 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | |||||| || |||||||| |||| || |||||| ||||||||| Sbjct 39109 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGTACCCTCTCGGACTACAAC 39168 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| |||| |||| |||| |||||| || | || ||| Sbjct 39169 ATCCAGAAGGAGTCGACTTTGCACCTGGTACTGCGTCTGCGCGGTGGC 39216 Score = 127 bits (140), Expect = 2e-24 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || ||||| |||| || || | || Sbjct 39217 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 39276 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| || | | | | |||| || || | ||||| ||||| || ||||||| | | Sbjct 39277 GACA-CGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTAT-CCCGCCGGATC 39334 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || |||||||| |||| |||||| ||| |||||||| Sbjct 39335 AGCAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCCGACTACA 39394 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||| || ||||| |||| ||||| |||||||| ||| || | || |||| Sbjct 39395 ACATTCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGTCTGCGTGGTGGCC 39445 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 38500 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG--TCAA 38557 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | ||||| ||||| | || | ||| || Sbjct 38558 GAGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGACCAGCAGCGCTTGATCTTCGCTGG 38617 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || || | || ||||| ||||||||||||||| ||||| | || || Sbjct 38618 CAAGCAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCT 38677 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 38678 TCATCTCGTCCTCCG 38692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || |||||| || | |||| || | | | | |||| Sbjct 38785 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACA-CGATCGACAACGTCAAGAG 38843 Query 38328 AAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| || || || || || ||| | ||||| ||||| | || | ||| ||||| Sbjct 38844 CAAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAA 38903 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 ||||| || || | || ||||| ||||||||||||||| ||||| Sbjct 38904 GCAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGA 38951 >seq97 Length=191658 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 153331 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 153390 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 153391 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 153448 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| | Sbjct 153449 TGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 153508 Query 38431 AGG 38433 ||| Sbjct 153509 AGG 153511 >seq316 Length=54270 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| || Sbjct 51738 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 51679 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || | |||||| Sbjct 51678 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 51619 Query 38457 CGTTTGAGAGGCGGC 38471 || || | || ||| Sbjct 51618 CGCCTGCGTGGTGGC 51604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160989669760