Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq653 168 8e-37 seq682 109 7e-19 seq922 91.5 2e-13 >seq653 Length=35529 Score = 168 bits (186), Expect = 8e-37 Identities = 487/740 (66%), Gaps = 17/740 (2%) Strand=Plus/Plus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085 |||||||||| | || ||||| || || |||||||||||||| || | || | || | Sbjct 3811 CGGCTTGGACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGATGCTCTTTTCGAGCT 3870 Query 7086 CTTTACCGTTAAAATAATCCGATAAC-ATTTGTTGAATTTTCGGGATTCGTGTCGATCCA 7144 || ||||| || | || | ||| | | || || ||||| || || || ||| Sbjct 3871 TCTTGCCGTTGAAGAAGTC-GCTAAGGAGCTTCTGGATACGGGGGATACGGGTGGAACCA 3929 Query 7145 CCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTT 7204 ||||| | ||||| || | || || | || ||||| | | || ||| || Sbjct 3930 CCGACAAGGACGATCTCGTCGACCTTGGTCTTCTCGATGCTAGCATCCTTAAGGACTTGC 3989 Query 7205 TCGACAGGTTCCATACATTTACGGAACAAGTCCATACA---CAGTTCCTCAAAACGTGCA 7261 ||||| || | | | | | | ||| || | | ||| ||||| ||||| ||| Sbjct 3990 TCGACGGGAGCGAGAG---TGCCGCTGAAGGCCTTGCCGTTCAGCTCCTCGAAACGAGCA 4046 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| |||| | ||| || |||| ||| | | || || || |||| ||| || Sbjct 4047 CGGGTGATGGTGGAGGCGAAGTCCTCGCCCTCGAAGAGAGAGTCGATCTCAACGGTGGTC 4106 Query 7322 TG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 || || ||| | ||| | || ||||| || ||||| || || || | | |||||||| Sbjct 4107 TGGGTGGCGTTGGAGAGA--GTACGCTTGGCACGCTCGCAAGCGGTCCTCAGACGACGAA 4164 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 ||||||| |||| || || || |||||| || | | ||||| | ||||| Sbjct 4165 GGGCACGGGGGTCGCCACTGATGTCCTTCTTAACCTTTCTGCTGAACTCCTTCTTGAAGT 4224 Query 7440 G-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCT 7498 | |||| | || | | ||||| || | |||||| | || || || || ||||| || Sbjct 4225 GGTCGA-GAAGGTTGGTGTCGAAGTCCTGACCACCAAGATGGGTGTCACCAGCGGTGGCC 4283 Query 7499 TTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCC 7558 ||||| |||| || || | |||| | | || ||||| || ||||||||||| Sbjct 4284 TTGACGGTGAAGACGCCGCCCTGGATGTGCAGGAGGGAGACATCGAAAGTACCACCACCA 4343 Query 7559 AGGTCAAAAATGAGTACGTTCGTATC---GTCGTCTTTGTTCTTATCGAGACCGTACGCG 7615 || || | ||||| |||||| | || ||| ||| |||||||||| ||| Sbjct 4344 AGATCGTAGATGAGGACGTTCCTCTCCTTCTCGGACTTGCCGGAGCCGAGACCGTAGGCG 4403 Query 7616 ATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC 7675 ||||| || || || || || || || ||||| || ||| |||||||| || | | Sbjct 4404 ATAGCGGCGGCGGTGGGCTCGTTGATGATACGGAGGACGTTGAGGCCAGCGATGGAGCCG 4463 Query 7676 GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCG 7735 || ||||| || || || || || ||||| |||||||| ||||| || | ||| || Sbjct 4464 GCGTCTTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGACGGCC 4523 Query 7736 TCCGTGACTTTCTTACCGAG 7755 | | || ||||| ||||| Sbjct 4524 TTCTCAACCTTCTTGCCGAG 4543 >seq682 Length=72138 Score = 109 bits (120), Expect = 7e-19 Identities = 230/341 (67%), Gaps = 3/341 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || | ||| || || | ||| Sbjct 34820 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCCTGGACCTCGAAAACACCC 34879 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 | || | | | | |||||||| || ||||||||||| || || | | || | | Sbjct 34880 TCGTCGACAGTAAGAATAGAAACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 34939 Query 7576 GTTCGTATCG--TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | ||||| || || ||||| || | ||| || || || || Sbjct 34940 TGGCGCTCCGACTTGTCATCCTTCTTGTCCAGGCCGTAAGCCAGAGCGGCAGCGGTGGGC 34999 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || |||| || |||||| ||| || || ||||| || | || || || || || Sbjct 35000 TCGTTAACAACACGAAGGACGTTGAGACCGGCAATGGTGCCGGCGTCCTTGGTGGCGGCA 35059 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| ||||||||||| ||||| ||||| |||| || || ||| ||| Sbjct 35060 CGCTGAGCGTCGTTGAAGTAGGCCGGAACCGTGACGACGGCGTTGGTAACGGTCTCGCCG 35119 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794 || || || || | || ||||| ||| | |||||||| Sbjct 35120 AGGTAGTTCTCAGCAACCTCCTTCATCTTGCTCAGAACCAT 35160 >seq922 Length=16827 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| |||| ||| || || || || || || | | ||| || ||| Sbjct 10407 CTTCTCGAGACCGTAGGCGAGAGCGGCGGCAGTGGGCTCGTTGACGACACGGAGGACGTT 10466 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || ||| | || | || || || || || || || || || ||||| |||||||| Sbjct 10467 CAAGCCGGAGATCTGACCGGCGTCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAGGC 10526 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||||| || || || |||| | |||| ||||| ||||| || | || ||| | || || Sbjct 10527 AGGGACAGTGACAACGGCGTTCTTGACGTTCTTGCCGAGGTAAGCCTCAGCGGTCTCCTT 10586 Query 7777 CATTTTGGTAAGAAC 7791 ||| ||| ||||| Sbjct 10587 CATCTTGCCGAGAAC 10601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635117802926760