Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq146 150 2e-31 seq694 105 8e-18 >seq146 Length=70891 Score = 150 bits (166), Expect = 2e-31 Identities = 361/543 (66%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 111930 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------G 111983 ||||| ||||||||||| | ||| ||| || ||||| || |||| | ||| | Sbjct 30241 ATTCCCATGCTTCGCGTCTACAACAACACTGCACGCTACGTTGACCAGGGTGGCAACAAG 30182 Query 111984 CGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 112043 |||| ||| | |||| |||| || |||||||||||||| || ||| | ||| Sbjct 30181 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACATCTTCAGTTTC 30125 Query 112044 CTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCT 112103 || || | || ||||| || | ||||| | ||| ||||| || |||| |||| Sbjct 30124 CTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 30065 Query 112104 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 112163 ||||||||||| |||||||||||||| | || ||| ||| |||| ||| | || | Sbjct 30064 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTTATG 30005 Query 112164 TGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTAC 112223 || || || || || || || | |||| || || ||||| || || || ||| Sbjct 30004 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 29945 Query 112224 ACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAA 112282 |||| ||| | || |||| | || ||| || | ||| | || | | ||| | Sbjct 29944 GAGCAGTATGAGAAGGAGGGTCGTGGCCGTGAGACCGTCCGCGCT-CAGAAGCTCTGGTA 29886 Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 || |||||| || | || |||||| |||| || | ||||| ||||| || ||| Sbjct 29885 CGCCATTCTCGAGGCCCAGGTCGAGACCGGTAATCCCTTCATGCTGTACAAGGATCACTG 29826 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 |||| ||||| || |||||||| | ||| |||| || |||||||| || || Sbjct 29825 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 29766 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 ||| | || | || | | |||||| ||||| || ||| | || || | ||||| Sbjct 29765 GATCGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCAACTTGGCCTCGCTGGCTCT 29706 Query 112463 CCC 112465 ||| Sbjct 29705 CCC 29703 >seq694 Length=40397 Score = 105 bits (116), Expect = 8e-18 Identities = 278/422 (66%), Gaps = 12/422 (3%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||||||||||||| || |||||| | | || | |||||||||||||| ||| Sbjct 9181 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 9122 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 |||||||| |||||| ||||||||||| || || || ||||| ||||| | ||| Sbjct 9121 CTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAGGGCATGCACACC 9062 Query 102324 GAGTTTGCGGTGGAACTTTT----CAAATTATTGCGTATTAAACCAACGACTGAGACTAT 102379 || ||||| || || || || | || || || | | ||| || | Sbjct 9061 GACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCG----AAGCCCAGCCCCGAGGCTGT 9006 Query 102380 TCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCC 102439 | || | | || || || || || ||||||| ||| | |||||| || || Sbjct 9005 CGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 8946 Query 102440 ATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTATGTATCTGA 102499 |||||| |||| |||||| | |||| | | || || |||| || |||| Sbjct 8945 TGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCTGA 8886 Query 102500 TAGATTGTTGAAGCAGATCGGGGTGCCTCCAATT--TGGAACTCCAAGAATCCATTTGAC 102557 | ||||| | | || || | || | | ||| ||| || || || ||| Sbjct 8885 CCGCCTGTTGGTGGCGCTC--GGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGAC 8828 Query 102558 TTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGAC 102617 ||||||||||||||| ||| ||| ||||| ||||||||||| ||| | ||||| ||| Sbjct 8827 TTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGAC 8768 Query 102618 TA 102619 || Sbjct 8767 TA 8766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727742720080