Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq973 109 6e-19 seq146 96.9 4e-15 >seq973 Length=7564 Score = 109 bits (120), Expect = 6e-19 Identities = 330/501 (66%), Gaps = 29/501 (6%) Strand=Plus/Minus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 || |||||||| || || | ||||| | || |||| ||| | ||| ||| | ||| Sbjct 4984 TCAAAACGACCAGGACGCATAAGAGCCTTGTCGAGAACATCAGGTCTGTTAGTACCAGCA 4925 Query 11566 ATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | ||| || | ||| || | ||| ||| || ||||| || || |||| |||||| Sbjct 4924 AGGACGACCACTTGC---TCCGAGGTGTTGAACCCATCCATCTCGGTCAGAATCTGGTTC 4868 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC-------TGCCGAACGCTT--C 11673 | ||| ||| | ||| |||||| |||||| ||| | | ||| | Sbjct 4867 AGCGTGCTTTCTCTCTCGTCGTTGCC------ACCACCAAAGCTTTGCTTAGCTCTTGAC 4814 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || |||| ||||| || ||||||||||| | ||| || || | | || || Sbjct 4813 TTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTCCGCGCAGTG 4754 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 |||| || || ||||| | | | |||||||| || |||||||| ||||| | | Sbjct 4753 GCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGGAA 4694 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || | |||||||| ||| || || ||| ||||| || |||| || ||||| | Sbjct 4693 CCGCTG-ACACTGAA-GAATGGCACTCCAGATTCACCGGCAGTGGCCTTTGCAAGGAGCG 4636 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CT 11909 ||||||| ||||| || | ||||| || | |||||||| ||||| || |||||| || Sbjct 4635 TCTTACCGGTACCGGGAGGACCAGAAAGGATAGCGCCACGCGGGATTTTAGCACCAAGCT 4576 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || |||| |||||| || |||||| |||| ||| | |||| |||||| Sbjct 4575 TC--TGGTAGATGCCAGGCTCTTTCAGGAAGCTGACAAATTCCATGATCTCCTGCTTGGC 4518 Query 11970 GGAGTCGATACCCTCAACATC 11990 ||| || || | ||||| Sbjct 4517 CTCGTCCATTCCGGCTACATC 4497 >seq146 Length=70891 Score = 96.9 bits (106), Expect = 4e-15 Identities = 419/654 (64%), Gaps = 9/654 (1%) Strand=Plus/Plus Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||| | |||||| || || ||| |||||| |||||| || |||||| | || | Sbjct 29795 ACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGATT 29854 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491 ||| || || ||| | || ||||||||| | ||| | | || | | || |||| || Sbjct 29855 ACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAG-CGCGGACGGTCT 29913 Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551 | | |||| |||| ||| |||| ||| | |||| || || | ||| || | Sbjct 29914 CACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAA 29973 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 |||| | || ||| || || ||| || | |||| ||| | || || ||| | Sbjct 29974 CATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTCCAGGTGCCGTTCTGCTCGA 30033 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCT 110671 | | |||||||| || ||||||||||| | || |||| ||||| || || | | Sbjct 30034 CACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTT 30093 Query 110672 CTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTT 110731 | || | || ||||| ||| || || | || | ||| || | ||||||||| | Sbjct 30094 CCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAGATGTCGGCGTGCCATGGCT 30153 Query 110732 CGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTG 110788 |||| |||| |||| || ||| ||| || |||||| ||| |||||||| | Sbjct 30154 CGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAG 30213 Query 110789 TGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCG-GATTGACCATTTGTACCCCTA 110847 || ||| |||| | ||||| ||||| | || | | | || ||||| || || | Sbjct 30214 TGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGTG-CCATTGGTGCCAGCA 30272 Query 110848 ATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTA 110907 || | | ||||||| ||| ||| | || | ||| || || || || ||| Sbjct 30273 ATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGACCGATGCCTCCAGCGGTCTTG 30332 Query 110908 CTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTT 110966 || || || ||| |||| || |||| ||||| || || ||| |||| | Sbjct 30333 GAGATCATGGCGCAGGTCT-TGAGGGTGTCATAGATACCGTCGATGCTATCCTCCTTCAT 30391 Query 110967 GGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020 | || || |||||||| | || |||||| || ||||| || ||||| || Sbjct 30392 ATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAGCGTTGAACAG 30445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588962092804200