Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq694 95.1 1e-14 >seq694 Length=40397 Score = 95.1 bits (104), Expect = 1e-14 Identities = 339/522 (65%), Gaps = 26/522 (5%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| || || |||||| ||||| Sbjct 8766 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCATG 8825 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTG----GCACC-CCAACTTGTTT 117095 ||||| || || || | ||||| | | | || || || ||||| Sbjct 8826 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAAC------ 8879 Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 || || || | || |||| ||||||| | |||| | | ||||| |||| Sbjct 8880 ----AGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAG 8935 Query 117156 GAGATT-ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 117214 ||| ||| || || || ||| | |||| | ||||| || || || ||||| | | Sbjct 8936 AAGAGCGACA-GGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGA 8994 Query 117215 CGATGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACG 117273 ||| | || || |||| |||| || || | || | ||| ||| | Sbjct 8995 TGATCCTCTCGACAGCCTCGGGGCTGGG-CTTCGACTTGATGTGCGAGAACAGCAGGCAG 9053 Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | |||||||| |||||||| ||||| || ||||| || || Sbjct 9054 GCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAGAAAGTGAGACCG 9113 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| |||||||| | ||| | || | | ||| || ||| |||||||||| Sbjct 9114 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATA 9173 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AA 117452 ||||| || || || |||| || ||| ||||||| |||| |||| || | Sbjct 9174 CCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG-TCGAGTTCTTGTCGCAGAT 9232 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||| || ||||| | |||||| ||| || || || || Sbjct 9233 CCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAAC 9274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966869078360