Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq146 237 3e-57 seq694 208 1e-48 >seq146 Length=70891 Score = 237 bits (262), Expect = 3e-57 Identities = 832/1275 (65%), Gaps = 47/1275 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | ||||| | | ||| | ||| || ||||| Sbjct 29139 GGGTTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTAC 29198 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | ||||||| || || ||||| || || ||||||||||| || Sbjct 29199 GGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGACGCGGTGGGCATGGGTGCG 29258 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || || ||| ||| | | ||||||| | || || | | | ||| | |||||| Sbjct 29259 ACGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTC-ACGCTGT-CCCAGT 29316 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | |||| | |||| |||||||||||| |||||| |||||| | Sbjct 29317 CCCAAAGGTC-----GGTCGGAG-CCTT---GTTCCACATGTCGTACTGCAGGATGCCCT 29367 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || ||||||||| | | |||||| ||||| |||||| || || | Sbjct 29368 GAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCG 29427 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | || || | ||||||||| || || |||| ||||||||| |||||||| Sbjct 29428 AGGCAGTGATGGATGCATGGTAGATGGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCT 29487 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| ||| ||||| | |||| |||| || || || | ||| || | Sbjct 29488 CAGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCA 29547 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||||| | ||| | || ||| ||| | ||| || ||||| |||| Sbjct 29548 CTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGA 29607 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||||||||||||||| | ||| | ||| | ||| || | | || | || Sbjct 29608 TGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCT--- 29664 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAA--ACTCAGGCAGGGCGATGCTG----GCCA 213498 |||| ||||| | |||| || || || ||| ||| || | | |||| Sbjct 29665 ---TGAAGTCGTAGACACCGTTCTCAACGTTGACGAAGGTCGGGAGAGCCAGCGAGGCCA 29721 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||| || || ||||| | || | | |||||||| | ||||||| ||| |||||| Sbjct 29722 AGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGG 29781 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAG 213617 || ||||| || || ||||||| ||||| ||| ||| | |||| ||||||||| Sbjct 29782 AGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTAC 29840 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||| |||| |||||||| | ||||| | | || || | |||||| | | Sbjct 29841 AGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGA 29900 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 || ||| | || || || || | | ||| ||||| ||||| || | | Sbjct 29901 GCGCGGACG----GTCTCACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGCCTC 29956 Query 213737 GAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| || | || ||| |||| ||||| || ||| ||||| ||| ||| Sbjct 29957 GAACTCGTCTCCATAAACATCTG-CCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTCC 30015 Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 || |||| | ||| ||| | | |||||| || || || | ||| || ||| |||| Sbjct 30016 AGGTGCCGTTCTGCTC-GACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 30074 Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 ||||| | | || || ||| || ||| ||||| ||||| || || ||| Sbjct 30075 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 30134 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 ||||| |||||||| ||||| | ||||||||| ||||| ||||| | |||| || ||| Sbjct 30135 ATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 30194 Query 213972 TGGTCCACC-AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG- 214029 ||||| || ||| || | ||||| ||| ||| || | ||| | || |||||| Sbjct 30195 TGGTCAACGTAGCGTG-CAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 30253 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAG 214087 | || || ||||| || || || || || | ||| | | | || ||| |||| Sbjct 30254 AGTG-CCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGA- 30311 Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147 || ||||| || ||| ||||||||||||||||||| | | | || || ||| || Sbjct 30312 -CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACC 30370 Query 214148 GGCCATGCTGTCATC 214162 | | ||||| || || Sbjct 30371 GTCGATGCTATCCTC 30385 >seq694 Length=40397 Score = 208 bits (230), Expect = 1e-48 Identities = 362/521 (69%), Gaps = 19/521 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | ||| |||||||| Sbjct 8762 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 8821 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | ||| ||| | | ||| | Sbjct 8822 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTT--GCCGAGCGCCACCAAC 8879 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | || |||||| |||||||||| | ||||||| ||| |||||||| | || Sbjct 8880 AGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 8939 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | || |||| || | || || ||||||||||| || | || || || | ||| Sbjct 8940 GCGACAGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 8999 Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130 || || |||| || || || | ||| | |||| | | |||| | Sbjct 9000 CTCTCGACAGCCTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 9050 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| ||| || || ||| ||||| |||||||||| |||| Sbjct 9051 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAGAAAGTGAGA 9110 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || ||||||||||| || | ||||| ||||| ||||||| Sbjct 9111 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAG 9170 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || | || | | | |||| | | ||||||||| || Sbjct 9171 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAG 9230 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| || |||||||| |||||| |||||||||| || Sbjct 9231 ATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGG 9271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931510804181760