Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq146 181 2e-40 seq694 158 2e-33 >seq146 Length=70891 Score = 181 bits (200), Expect = 2e-40 Identities = 499/744 (67%), Gaps = 27/744 (4%) Strand=Plus/Plus Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||||| ||| || || || ||||| || | || |||| | |||||| || || Sbjct 29717 GGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAG 29776 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831 |||| || ||| || || |||| || || || |||||| ||| ||| | |||| Sbjct 29777 GTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCCT 29835 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||| ||||| |||||| || ||||| | ||| ||| | ||||| || |||||| | Sbjct 29836 TGTACAGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCT 29895 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTATAG 221947 |||| |||| || ||| || | | | |||||| ||| |||||| | ||| || Sbjct 29896 -TCTGAGCGCGGACGGTC-TCACGGCCACGACCCTC---CTTCTCATACTGCTCGTAAAG 29950 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007 ||| | | |||| || || || | || |||| || || ||| | ||| ||||| Sbjct 29951 AGCCT--CGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATA 30008 Query 222008 AGACTCCAG-TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || ||||| ||| ||| | | ||| | | ||||||||| || || ||||| || || Sbjct 30009 AGGGTCCAGGTGCC-GTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGC 30067 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA-AA 222125 | || || || | | ||| |||||| ||||| ||| || | ||||| | || Sbjct 30068 GTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAA 30127 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 ||| || | |||| |||||||| ||||| || |||| ||| | || || || ||||||| Sbjct 30128 ACTGAAGA-TGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGT 30186 Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 |||||||||| | || | | | ||| | |||| ||| |||||| | || | || Sbjct 30187 TGCCACCCTGGT-CAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAG 30245 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304 |||||| || |||||||| |||||| ||| ||| | || | | || Sbjct 30246 CCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCAC---GGATGC-GGTG 30301 Query 222305 GACAT----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 |||| ||||| || || ||| || ||||||||||||||| ||||||| ||||| Sbjct 30302 AACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTC 30361 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 ||| || || || |||||||| | | | || || ||||||| || ||||| Sbjct 30362 ATAGATACCGTCGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGG 30421 Query 222421 TTTGGTGGAACAGGCGTTAAACAG 222444 |||| || | ||||| ||||| Sbjct 30422 CTTGGGGGTTCCAGCGTTGAACAG 30445 >seq694 Length=40397 Score = 158 bits (174), Expect = 2e-33 Identities = 344/516 (67%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| |||||||||||||||| ||||| || |||||| | | ||| | | || Sbjct 9271 CCCTGCATCAAGAGGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACC 9212 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 || | ||| ||| | ||||| || || || ||||| ||||| |||||||| || || Sbjct 9211 TTCGCATCGCGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTC 9152 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||||||| || ||||| |||||||| Sbjct 9151 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTC-ACTTTCTCCAACGA 9093 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048 ||||| | | || ||||| | |||| || |||||||||||||| | | || || Sbjct 9092 ACTCATTTCCCGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCG---CA 9036 Query 26049 CTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGAT 26108 | | || || | ||| | ||| | || ||||||| |||||||| || || Sbjct 9035 CATCAAGTCGAAGCCCAGCCCCGAGGCTGTCGAGAGGATCATCATCGAGGCTGTCGATAT 8976 Query 26109 CGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACT 26168 |||||||||||| | | |||||||| || || Sbjct 8975 CGAGAAGGAGTTCCTGACGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGCCACGCT 8916 Query 26169 CATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCA 26227 |||| |||| ||||| |||| || || |||| ||| | ||| | ||| || | | Sbjct 8915 CATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGTTGGTGGC-GCTCGGCAACAAGA 8857 Query 26228 GACTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAA 26285 ||||| |||| | ||||| |||||||| ||||| ||||| ||| | || || Sbjct 8856 AGTACTACA--ACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAA 8799 Query 26286 GACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||||| || ||| | || || ||||| || Sbjct 8798 GACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 8763 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||| || || |||||||| || Sbjct 9660 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGACCTC 9601 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| || ||| | Sbjct 9600 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 9541 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || ||||| || ||||||||||| || |||| | Sbjct 9540 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 9481 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | || || ||| | |||||| || |||||||| |||||||| Sbjct 9480 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGAT 9428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928822867652160