Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq146 107 2e-18 seq694 95.1 1e-14 seq973 82.4 9e-11 >seq146 Length=70891 Score = 107 bits (118), Expect = 2e-18 Identities = 344/531 (65%), Gaps = 11/531 (2%) Strand=Plus/Minus Query 75530 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG------G 75583 ||||| ||||||||||| | ||| ||| || ||||| || | || | || | Sbjct 30241 ATTCCCATGCTTCGCGTCTACAACAACACTGCACGCTACGTTGACCAGGGTGGCAACAAG 30182 Query 75584 CGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTC 75643 |||| ||| || |||| ||||| | || |||||||| ||||| ||| | ||| Sbjct 30181 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACATCTTCAGTTTC 30125 Query 75644 CTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCC 75703 || || | || ||||| || | || || | ||| | | || || || | | Sbjct 30124 CTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 30065 Query 75704 CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTC 75763 || |||||||| || || |||||||| || || ||| || || ||| | ||| | Sbjct 30064 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTTATG 30005 Query 75764 TGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTAC 75823 || || || || || || || | || | || || ||||| || || || ||| Sbjct 30004 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 29945 Query 75824 ACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAA 75882 ||||||| |||||||| | | | || ||| || | || | || | | ||| | Sbjct 29944 GAGCAGTATGAGAAGGAGGGTCGTGGCCGTGAGACCGTCCGCGCT-CAGAAGCTCTGGTA 29886 Query 75883 GGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTG 75942 || |||||| | | ||| ||||| || | || | ||||| ||||||||| || Sbjct 29885 CGCCATTCTCGAGGCCCAGGTCGAGACCGGTAATCCCTTCATGCTGTACAAGGATCACTG 29826 Query 75943 TAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGA 76002 ||| ||||| ||||||||||| | || || ||| ||||| || |||||| || Sbjct 29825 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 29766 Query 76003 AATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 || | |||||||| | |||||| ||||| ||||| ||||| || Sbjct 29765 GATCGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCAACTTGGCCTC 29715 >seq694 Length=40397 Score = 95.1 bits (104), Expect = 1e-14 Identities = 339/522 (65%), Gaps = 26/522 (5%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066 || || || || ||| |||||| | ||||| || ||| | || |||| |||| Sbjct 9274 GTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCG 9215 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||||||| ||| || |||| || || || ||||||||||||||| ||| || Sbjct 9214 A-CCTTCGCATCGCGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTC 9156 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | | || | ||| | |||||||| ||||||||||| || || ||||| || Sbjct 9155 CTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACTTTCTCCAA 9096 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAG-A 65245 ||||| |||||||| |||||||| | ||| || |||||| ||| ||| | | Sbjct 9095 CGAACTCATTTCCCGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCA 9036 Query 65246 CTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || || |||| |||| || || | ||| | | ||||| || || | Sbjct 9035 CATCAAGTCGAAG-CCCAGCCCCGAGGCTGTCGAGAGGATCATCATCGAGGCTGTCGATA 8977 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGT-AATCTCATCGGTATGAACTCTGAG 65364 | ||||| | |||| | ||| || || || ||| ||| |||| ||||| | | Sbjct 8976 TCGAGAAGGAGTTCCTGACGGATGCGCTGCC-TGTCGCTCTTCTCGGCATGAATGCCACG 8918 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGC- 65422 |||| | ||||||| |||| || | || || || ||||| || || Sbjct 8917 CTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCT----------GTTGGTGGCGCT 8868 Query 65423 ---CACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCT 65474 || | | | ||||| | || || || ||||| ||||| |||||| || Sbjct 8867 CGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCT 8808 Query 65475 TGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||||||||| |||||||| ||||| ||||| Sbjct 8807 CAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 8766 >seq973 Length=7564 Score = 82.4 bits (90), Expect = 9e-11 Identities = 218/327 (67%), Gaps = 21/327 (6%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| || ||||| || ||||| | || | ||| || ||||| || ||||| || Sbjct 4580 TGGTGCTAAAATCCCGCGTGGCGCTATCCTTTCTGGTCCTCCCGGTACCGGTAAGACGCT 4639 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 ||| || |||| || |||||||| || |||||| || |||| || || | | Sbjct 4640 CCTTGCAAAGGCCACTGCCGGTGAATCTGGAGTGCCATTCTTC-AGTG-TCAGCGGTTCC 4697 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || |||||||||||||| ||||| ||| | || || |||||||| || | | Sbjct 4698 GAGTTCGTGGAGATGTTTGTCGGTGTTGGTCCTTCGAGAGTACGCGATCTGTTCGCCACT 4757 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-C 175510 || || ||| | || || || || | ||||| ||||| || || || | || ||| | Sbjct 4758 GCGCG-GAAGAGCACGCCTTGCATCATTTTCATCGATGAAATCGACGCCATCGGAAAGTC 4816 Query 175511 AA--------CGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAA 175562 || | ||| ||||||| | || |||||||||||| || | || Sbjct 4817 AAGAGCTAAGCAAAGCTTTGGTGGT------GGCAACGACGAGAGAGAAAGCACGCTGAA 4870 Query 175563 TCAACTACTCACCGAGATGGATGGCTT 175589 || | || |||||||||||||| || Sbjct 4871 CCAGATTCTGACCGAGATGGATGGGTT 4897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555513500320