Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq33 298 7e-76 seq653 174 2e-38 seq97 134 2e-26 >seq33 Length=265719 Score = 298 bits (330), Expect = 7e-76 Identities = 561/823 (68%), Gaps = 9/823 (1%) Strand=Plus/Plus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||||| || || || ||||||| || || |||||||| || || || || | || Sbjct 23711 GCTCTCCGCCGCCTGCGGACTGCCTGCGAGCGTGCCAAGCGCACCCTGTCCAGCTCTGCC 23770 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | | ||||| || || |||| || || ||||||||||| || | || ||| Sbjct 23771 CAGACCTCGATCGAGATCGACTCCCTGTTCGAGGGTATTGACTTCTACACCTCGATCACC 23830 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | || | || | ||||| || || || Sbjct 23831 CGTGCCCGTTTCGAGGAGCTGTGCCAGGACCTCTTCCGCTCTACCATGGAGCCCGTCGAG 23890 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || || || ||||| ||||| || ||||| || | || ||||||||||| || Sbjct 23891 CGTGTCCTCCGCGACGCCAAGATTGACAAGTCGTCCGTCCACGAGATTGTCCTTGTCGGT 23950 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || |||||||| || ||||| || ||||| | || ||||||||| || || Sbjct 23951 GGCTCCACCCGTATCCCCAAGATCCAGAAGATGGTCTCCGACTTCTTCAACGGCAAGGAG 24010 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| || || || ||||| || ||||| || || ||||||||| Sbjct 24011 CCCAACAAGTCCATCAACCCCGACGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCTGCT 24070 Query 196421 ATTCTCTCAGGTGTTGACAATAAT--AACGTCC----AAGATCTTCTGCTACTTGATGTT 196474 || || || || ||||| | | | |||| | || ||||||| || || ||| Sbjct 24071 ATCCTGTC---TGGTGACACTTCTTCCAAGTCCACCAACGAGATTCTGCTGCTCGACGTT 24127 Query 196475 GCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGG 196534 || ||| | ||||| ||| | || || || |||||||| |||||| | || | | Sbjct 24128 GCTCCCCTTTCCCTCGGTATCGAGACCGCCGGTGGTGTCATGACTCCTCTCATCAAGCGC 24187 Query 196535 AACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCA 196594 ||||| || || || || |||||| | ||||| || || | ||||| || || || Sbjct 24188 AACACCACCATCCCTACCAAGAAGTCGGAGGTCTTCTCCACCTTCTCCGACAACCAGCCT 24247 Query 196595 GGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTT 196654 ||||| | ||||| || | || || || || |||| | ||||| ||| | || || Sbjct 24248 GGTGTCCTCATTCAGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTC 24307 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 || | ||||| | || || || || |||| ||| | |||||||| |||||| | || Sbjct 24308 GGCAAGTTCGAGCTTACCGGCATCCCCCCTGCGCCCCGCGGTGTTCCCCAGATTGAGGTC 24367 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 |||||| | || || || ||||| | |||||| | ||| || |||| ||||| Sbjct 24368 ACCTTCGACCTTGATGCCAACGGAATCATGAACGTCTCCGCTCTCGAGAAGGGCACTGGC 24427 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 || | | |||||||| || ||||| || ||||| || || || |||||||| || || Sbjct 24428 AAGACCAACAAGATTGTCATCACCAACGATAAGGGTCGTCTGTCCAAGGAGGACATCGAG 24487 Query 196835 CGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 |||||| || || || || ||||||| || || || |||| Sbjct 24488 CGTATGCTTGCCGAGGCCGAGAAGTACAAGGCTGAGGATGAGG 24530 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| |||||||| |||||||| ||||||||||| || || Sbjct 39217 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 39276 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || ||||||||| || ||||| || || || || |||||| Sbjct 39277 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCAG 39336 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || |||||||| ||||| || || || || || ||| | || |||||| Sbjct 39337 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCCGACTACAAC 39396 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| ||||| ||| | || || | || || ||||| Sbjct 39397 ATTCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGTCTGCGTGGTGG 39443 Score = 170 bits (188), Expect = 3e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||| ||||| ||||| |||||||| ||||| ||| |||| | Sbjct 38785 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACGATCGACAACGTCAAGAGC 38844 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||| || || || ||||| || | || || ||||| || Sbjct 38845 AAGATCCAGGATAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 38904 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| |||||||| | || |||||| | || |||||||| ||||| ||| Sbjct 38905 CAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTTCAC 38964 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 38965 CTCGTCCTCCGCCTCCGTGGTGGT 38988 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || ||||| || || || || |||||| | || || |||| Sbjct 38984 GTGGTATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGT 39043 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||||||||| || | || ||||||| ||||| ||||| ||||| || || | Sbjct 39044 CATCGGACACAATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGG 39103 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || || || ||||| ||||| || || || ||||||||| | || | Sbjct 39104 ACCAGCAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGTACCCTCTCGGACT 39163 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||||| ||| | ||||| || || | || || ||||| Sbjct 39164 ACAACATCCAGAAGGAGTCGACTTTGCACCTGGTACTGCGTCTGCGCGGTGG 39215 Score = 161 bits (178), Expect = 1e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| |||||||| ||||| ||||| ||| |||| | Sbjct 38502 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGC 38561 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || ||||||||||||||||| || || ||||| || | || || ||||| || Sbjct 38562 AAGATCCAGGATAAGGAAGGCATTCCTCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 38621 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| |||||||| | || |||||| | || |||||||| || || || Sbjct 38622 CAGCTTGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTTCAT 38681 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 38682 CTCGTCCTCCGCCTCCGCGGTGGT 38705 >seq653 Length=35529 Score = 174 bits (192), Expect = 2e-38 Identities = 471/718 (66%), Gaps = 7/718 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||||| || || || ||||| || || ||||| | | || Sbjct 4513 ACCGTCCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAAGACGCCGGCTCCATC 4454 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || || || || || || || || ||| Sbjct 4453 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCTATCGCCTACGGT 4394 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || | |||| ||||| ||||||||| Sbjct 4393 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTCATCTACGATCTTGGTGGTGGT 4334 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || || | || | || || | ||| || ||||| || ||| Sbjct 4333 ACTTTCGATGTCTCCCTCCTGCACATCCAGGGCGGCGTCTTCACCGTCAAGGCCACCGCT 4274 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGAT 196015 ||||| || ||||| |||||| | || ||||| | |||||| || || | Sbjct 4273 GGTGACACCCATCTTGGTGGTCAGGACTTCGACACCAACCTTCTCGACCACTTCAAGAAG 4214 Query 196016 GAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTT 196075 |||||| | ||||| |||||| || || ||| | || | || |||||||| || Sbjct 4213 GAGTTCAGCAGAAAGGTTAAGAAGGACATCAGTGGCGACCCCCGTGCCCTTCGTCGTCTG 4154 Query 196076 AGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGGTTG 196133 ||||| || || || |||||||| || |||||||| | ||| | || || | |||| Sbjct 4153 AGGACCGCTTGCGAGCGTGCCAAGCGTACTCTCTC--CAACGCCACCCAGACCACCGTTG 4096 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 |||| || || | || || || |||||| | || || |||||||| ||||| | Sbjct 4095 AGATCGACTCTCTCTTCGAGGGCGAGGACTTCGCCTCCACCATCACCCGTGCTCGTTTCG 4036 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||| | ||| | || || | | | || || || ||||| ||| | Sbjct 4035 AGGAGCTGAACGGCAAGGCCTTCAGCGGCACTCTCGCTCCCGTCGAGCAAGTCCTTAAGG 3976 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 | || | || || ||| | ||||| || || || |||||||| || || || ||||||| Sbjct 3975 ATGCTAGCATCGAGAAGACCAAGGTCGACGAGATCGTCCTTGTCGGTGGTTCCACCCGTA 3916 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 | || || || || | ||| ||||||||| || | | | || | | Sbjct 3915 TCCCCCGTATCCAGAAGCTCCTTAGCGACTTCTTCAACGGCAAGAAGCTCGAAAAGAGCA 3856 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 ||||||| ||||| || ||||| || ||||| ||||| || || | ||| ||||| || Sbjct 3855 TCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAAGCCGGTATCCTCTCCGG 3798 >seq97 Length=191658 Score = 134 bits (148), Expect = 2e-26 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| || || ||||| || || || || |||||||||||||| ||||| || ||||| || Sbjct 153330 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 153389 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || |||| |||||| || || ||||| |||||||| || || ||||| || || Sbjct 153390 CGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 153449 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || |||||||| ||||| || ||||| | || |||||| | || || Sbjct 153450 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 153509 Query 172050 GG 172051 || Sbjct 153510 GG 153511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657846866224080